SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR28410_c0_g1_i3
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_MYCBP2-like_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008045 P motor neuron axon guidance
GO:0008270 F zinc ion binding
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0021785 P branchiomotor neuron axon guidance
GO:0021952 P central nervous system projection neuron axonogenesis
GO:0030424 C axon
GO:0032880 P regulation of protein localization
GO:0042177 P negative regulation of protein catabolic process
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0048667 P cell morphogenesis involved in neuron differentiation
GO:0051493 P regulation of cytoskeleton organization
Transcript
Level		FPKM:4.58 TPM:6.10
ORF EntryO_BomoN4EE10288_complete:A_BomoN4EE_TR28410_c0_g1_i3
Sequence
(Nucleotide)
ATTTATTTTTCAATTATTTTTCAACTGTGACGGATCCCTGAAAATCTGTTAGTATAAGTT
AAGTAGCGGTTTGTTAATTTTATAAGTTATATTCGCGGCTGGAGCAGTGCCTAAATCAAA
ACACATCATAAATAAATGAAAAAAAAACATTACAAGATGCCGGCGAAATACGTTAAAAAA
TATTATCTTCAACATTTCGTTTCTATGTTATTCAGATTTTAATTCGTGATTCGTGATTCA
TTATTTTAGCAAGCTGTCTCACGATTTATTTATTAATTATTCTGATTTGCATAAAAAAAA
TTGCTTATCATTTACGATTTTAGTGTCGAGGTAATTTATATACAAAATAATCGCTTTAAA
AAGTATCATCTACATCAGAATGATATCATTATATTAACACATCGTTGGCACTGCTCTTAG
AAACTTAAAACAATTTTACGATGACGTTATACAGTTCATACAACACAAAGACACGCTACT
TAAGGCGCAGATAAAATTTTATTGAAAATAATGTTAGTCTGTAGTATAAGTTAGTATAAG
ATAGCAAAGGAAAACGTAAATCAGTCGACCATAGGTGAGTGTAAAAGATTAACAAAGAAT
TATAAAATTTATGGAGACAAATTAATAGGGAAAAACATCCGATATAAGTTCTCAATACAC
ACACTAAACTACTGCTATAATGCAATTTTAAAACACGCATGCAATACTGAAAATCTTAAC
ATATAAAATACTATATATTATACAGAATGTGAAATAAAATTTGTAGCTGGCTTCAGCGTG
AGAGAAAAACAATTTTCTATATTGATTTTTCGCTTGCCATTTATTTGTCTGGTGTCTTCT
ATTAAACAGCAGTACCTCTTATAAGAGATACTCGGTTACCCTTACACTCGGTTATATGTG
TTTATGTTTGTTAGTCAAGACAAAGTTGTATGGAAAAAATACAGTGTGTTAAAGTCGTGA
TAAAAAAAGAATAAACATTAAAACTTAGTGCAGTTAATGAGTTTATAGAAACTTTTGTCA
AGATGATCAGTTAAAGATATGAAATGTACAATACTTAAAATACTCAAAGCAAACTAATTC
GTGTTTTATACTCACTGCTGAAGAGATTGGTCATCAAAAATTTGATGAACTGTTGGAAGT
GAAGTCAGATCGAGTCCCCGGGATAGGAAAAGCGTTTCGCAAGCATCTTGGGGAGTTTCG
TCCTCGCCTCCGGTAGGGTTGCCTCCTATCATTGCTTGAAGCTGTACTTCTAGTAGTGTT
GCGAAACTCATCGGAGGTATCTCAAGATCGGGTGCGAGCAGTTTCGAAGCGCACGCCGCA
CCGGTGAACATGAGGTCCATCTCTAGGGCGACCAGACCTTGCTTCTGCGATGTCAAGTTG
GAATCCTCGTAGCCAACGGCCAGACAACGAAAACCGAAACGGTTCTCTTCGTTGTTAGCT
TTATTGTATTCGGTGAGATAATCTGAGGCTGTTTCCAGTGAAAATATCACTTCGTTTCCC
GGCACCAGCAACGACCTTTGCGGCCATTCAGTTGCTACGTTGGAGAGCTTAGGTGTGACG
CTGACGTAAGTGCAGTTATATTGCATGCACGGGGCGTCCGTGTCAACTGCTTCTACGTAA
TCGTCAAAATCGCCTTCCGGCCCCAAATGTACTAGACGCTTCTTAAACGGTATATCGGTA
CGAGGCTCTTCAGTACAATGACACTTGTGTTTCGGTGCTCCAGCCACAGCGAATACAGTG
AGCGTGTCTTCGGGCTGAGCTGTTATACTCCTCGGATCCATCTCCAATACAATCCACGAC
ACCGTAGTCGGAAACAGCACTCTCATGTTGGTGACAGTCGCCTGCTTGTATGGGTGCTCA
CTTTCGACCCAACTGTAGTATTGGGCCGCGGTCGTGTTTATATTGGTCTCCTCCACGGAA
GGCACGAGTAGATTCATAGCACCCACGTGTGGTAAAAGTTTCCGGATCATTTCCAATATT
TTGATTACGCTCTTTGGATCGTCAAGTCCATCCAGGCTGGCCAGAGTATAGGGTATGAGT
GTATTGATAGCTGGCGATTGTTGCAGCACAGAGGCATTCCTCTTGAGATCCTCGGCCGTA
AGCTCATTGCGCAAAGTACAAAACAGCTCCGAGCCCCTCTCCATTACTAAGGACGCCACT
CGTAATGTTATAGTACGAAGGGCGGTGACCAGAGAGTCAGTACTCTCCGAGCTGCAGAGC
GAAGTTGTAGACGAACGCGAATAGTAAACGAGGCAAGGTATCTGTCCTCGAGCCAGAGTA
GTTCCATTGAAGCTTAGAGAGCAAGAAGCAAAACGGAAGGTTGTTCCGTCAGGGCCCTTC
ACCGAAGGAAGACCGCAGTCACCATTGGCCGTTCGACCACCATGATTACATAGTCGTATA
GCGTAACGAATCTCTTCTTTCAAAAGTATTGGGCGGTCAAATTTCAACTGCACCATATCG
TGCTGACACTCGGCTCCACTGAAAGCGCCGTGAGCAACTTCGACGCTAACCCAACAATGA
GCAGGATTCATTTCTTCCGGGGACGACCGTGACTGCCTGACGTCGTTCAGCAGCTCGATC
GAGTATTCGTAGTTACCGGGGCCGCCGTAAACGCAAACCCCGACCAACATAACGCCGGAC
CGATCGACGGTAAAGCATATAGCATCCGGACTTCCGTTGCCGGTGTTCCAGGCGCGCGAC
TGATTGACGCGCATAAAACGCGAAGGCGTCACTAAGTGTTTCACCGAACTAGAGTCCACG
TCGTCCCTAATATTGGCAGTGCTGTGGGTAAGTTCGGCGACTATTCTGACGGTAAGTTTG
CAGCAAAACTCGGCGAGTCGTTCGTGTTGCTTGATCTCGCCGTGATCGTGAGGCTGGTTG
CAAGGACGCGTCATCATCTGACGCTTGATCGGAAGAAGTACAATATCGAGTAGTTTGGTA
ATCACATCCAACAGATGCCAGTCGCTGAAGTTCTGCTTCGTTTCAGTCGTCTCTTGAAAC
TTCGGTGATTCCATATTTCCCGTTCTGGGCGGAATAGGAGGTGGCTTCTGGGCGTACGAT
GATCTAGGTACGGTCGCCGATTTCAATGGCATCTCTTTGATAACCACTTTACTATCGGGG
CGCTTATTCTCATGCGTTATGAGATAATTTTGAGTGACGGGAACTATGTATTGCAGAACA
TCTCGCAGACTCCTTGATACACACATCGCGGCACAAGTAGCCGTCAGCTCACGAATTTGG
GCAGGAGGCACTGTGCCCTCCTTTACATAAAATAGCAGGCTGCACATGTGGTTCCATTTT
AAAGTGGGCGTCGGAAAGAATGCGTGAAAACAGGCAGTGACCGTGTCGTGTGCCTCATTG
AAAACTGAATGCATCAGCTCCAACGCAAACTGAACATAGCAAACTCGACTAGACCTAATC
CTGCCCACTCGTCTTGGGATCCGAGAGCAAGTTGGGGTACAATCGGCCATTATCATTTGT
ATTAAATTCCTCACTTCTCCTATGGATTCAAAGTATGACATATACTCGTGCGAATTGCGT
TTTCTGTTGTTTTGAGGGTATATTTCGTTGATGTAGAACTTCACGAGTCTCAGACAAGAC
CTCACCACGTACACTAATCGCTTTTGCTGCTTCATCAACAGCAGTTTTTGGTAGGTAATA
GGAATCTGTCCGTTCGTGTCCAAAATGAATTCTTTTAAAGATGCCCATCCCCAAGTTAAT
AGTGATATTAAAGATCTGAAGCACGGCACTGTAACTTTCCTTGATATATTTTTACTGAGA
GGAATTATTGGTTCTCCCGGGTCGGTAATCCTCATTGGAAGATTATGATCGGGCGTTGCA
ATATTGTACAGGAGGCACGGTATCTGCCCAGCATTAACGTCGGTACCGTTGTTCGATTTC
TTTGAGGATTTGAAATGGAAACCGACTTCATCATTTATTACCATCGCTTGTCCCGAAGAA
CCACAGTCCGATGATGGACCGTTCATGCAAGCCCACGCCAAATACCATCGGTTTGCAACT
ATTGGTACTGGTGTTTCGAACAGTACCGGGAAACGATCCCTCGGCGCGCACTCGAATACA
ATTTCGTCGCTCTCGGCTAACAATTCACCATCAGCCTCTTGATCTCCGCCGTCAAGTCCA
ATGTCATATAACTTTATCTTCGCAGTGTAATCCCCACGACCCCCAAACAGCCCATAACCG
CCTAGCAATATATCGGTGTCGCACATAAACCGTATAGCTTCAACGGAATGTCCAGAGTAT
CCCCACCCTCCGCCGTGGCTCTCGAAACGGTTCACGGTGAGGAAGTCCTCTTTCATGGAC
GCCTCTGGAGCAGACGCGTTGTCTCGTTTACACTCCACTTGACTCAGCCTGACGTCAAAT
TGCAATTTGTTATCGTGTGCATAGTTCAGGGAGTCGAGACACGCGAGCAGATGCAGGACC
GCGTGCATTCGTGTGATTGAACACTTTGGCGCACACGGTATAGCCAGCTCTTGGCTCAGA
ACCGACATGTTCACTAGAGCCACGATATCGGTCGGCTTCTCTTCATTACTGCATGTCACT
TCGAAACTCTCCAAGTTCTTGAAATCTTCCAAGCGCCTCATGTTTCCGCAGCTCGGATAA
TCGAAATCATTGTCGTCATCGTAACCGTCAGGGTCATTGTTGCAGCACCTCTGTATCTTG
TGCGCATCGAATGCTAGTATGTTGTAACATCTTATCACTTGCACCTGAGGATGGTAGCAC
CACAGGACATCGTAAAGCGGATCGAGGCACGCGAGTGTGTTTACAAAGTCGACTTGTTCT
GAACCTGTCCAAGCATTACAAGTTCCGTCGTTCTTATTGATGGTCAGACATTTAAATGTG
TGCTCCGGGCGATTCGGAAGAATCAGAATACAGTTATTGTTGGAAGTAATGGTCGAGCTG
AAAAGCGTATCGGTTTTGATGAGAGCTTGAGAGATTTGCACGAATGTTTGGTCCCCTGAA
GCCGAAATCCAAACGGCCTTGCATGAATACCGCGGACCCAGTCGGGGTACTCTCCCTGGG
GTAGCGTACCATATCAGACCTCTCTCCGAGCGAGGCGCGTCGTCATCGCAAGGACGACCG
AGTGACCCTTTCTGATAACTGCCAAAAGTGAAAAGTTCTCCATCTCTAGTCAGGACAGCA
GTGTGATTACTGCCAGCCGCGATGGCTGAAGCTTTAGGTACCTTTACTCGGATTATTCGA
TGATGTGTTGATATATCGCCTGCGCCCAACTGACCAAACTGGTTTGAGCCGAATGTCAAG
ACTTCACCATGTTCGGTGAGTAGCACAGTATGATGAAGCCCACACGCAACGGCCGCGACG
CGGTGTCCTCCGGGCACAGCCACGCGAGCAGGCGGAAGACAACTCACTTTGAAGCTGGTG
TCTCTATCGTCTAGACCGCTTGAATGTCCCTCGTATTGCGTATACCTCGATGGCTCCGGG
TCATTCTTAGCTTCTGCTGCGGTCGATGTCTCGGCGTCCGCGTCGTCGTCGGCGTCCGAG
ACACGCTCGGTACATTCGGCGCGTCCGGCCGCGGCAAACGCGTCCGCACATCGACGGCAA
ATTCCACAAACGCTGCAGCCGCTATCGCCTTCACCGCACCCACACTTTTCTCCGGGCACT
CTGTTTGGTAAATGAGAGCAATGGCACGCATTAGAGAATCCCGTGCACTCGCAGCAGAGC
ACGCACACGCGACAATAGTCCGTCGTCCAGCTATGCGGCGTCTGGCATATGCGGGCTTCG
TCTTTGTTCTCGTCATGATGACGAGAATGAGACGGTTTTTCTTTTGTATATCCAAATTCG
CGACCGCACTGTCCCTTATTGTTTATACCAAGGGTATAGACCAGTCCGAAGCTCGTTAAA
ACAACTGCATGAGCTTTCCCTAGCGCCACCTGTATGACTCGTTCGTGTCTGAGACCGAGA
ACTAGTCCCGACGAATCGCAATGCAGGGTGTCTTTTCCGAACATTAGTAAGAGACCTTGA
CGCGTTACCAAAGCGGTGGAGCCATAGTTACAAGCCGCATAAACTATGTGATGTCCTTCA
GCCTTGAATATCTTTTTAGGCCTTGTAGGTTTTGGTGTCCGTCGATGTCTGATCGCATCA
CCATCTTCTCCTCGTCTTGCCACACCGGTAAACAAAGCCGTGCCGTTGTCTAGTACTAAT
ATAGCGTGTACGCCCTCATGACCGACGGCCACCTGAGCAATTTTTGCTTTTTTTGCATTC
GGCGCTTCGTTCTTCGTGACTGTTGTTTCTTTCATTAAAGTCCATTTTTTTGTGTTAGCA
GATGCCGCTTTGTAACCGAGACTACTGCCTTTGCCGCAGTAATATACCTTTCCTGATACA
GTTGCTAGCAGTCCAAATTCTTGTCCCCCACAAATACTCAAGAGGGGGTCGTCGTCATTA
TCATCAAGTTGTGTTGCAACCGGTACGTCCATATCAAGGGGCCGACGTGGCAGGATGTCT
TCGAATGGCGCCCGACCCATTACTAACGTTCTACGCCTTAATAAGTGCACATTGAATTCT
TTCTGTGAAGTCAAGATGTTTGTTCCTTCCTGACGACTTGCAGTGTCCACACTATACATT
CGTATCGTCAACGTGTCAAATTTTGTGAGTAAGATTAGCCCAATTTGATTGCCATCACTA
AACACGGCGGATTTAGATTCAATCGGTGCTGGTAGCCCTGGATCTAATTTGATTGTTTGT
CGTACTTCTAGTGTATCTCTATCTATTTCGTAGATATCAGTCTTTTTTCTACCAATTCTT
ACAAACAACTTAGTTCTACAATACCCAAGCCATCCATGTCGCTCACCCGCGAAAAAATCT
GGTTTATAAGAATAAACATGTTGCTTTATAGAACTGCCATAACCAGAGCCAATCTTCAAC
AATCCTTTGGAAGTGAAAACATAGAGATAACAACCGTCCGATACAAGAGACCGTACAACT
AGGTCACCCGAACCAGACGTTAACGAAACTGGAAGATCTACAGGAAAACTGTTGATGAGC
GACAGTGATGGTACACCGTACTGCAACCACTGGTTACGGGATGGAGAACCCAGAATAACG
GACTGAACGCTTCGTTGTAGCGTGGTCAGATTTGCAGGAGTCTTCAAGTATTGGTCTAAG
TACAATGGAGCACACATTGCCAAGGAGGCCGCTGCATTTAATATTAATTCAGCTTCGCCA
CGTGCGACTGACAATGCAATTAAACAAGAGCTGCTTAAAGCTGTGAGTTTTGAAGGATGT
TCAGAACGACCACTAGGGCTCACACCACTAGACACTTCAACTAGCATAGAATGTATATTA
AAGATCATATCGGTTGGTTCTTGCGAAAGCTCTTCAGGAGAATGCCCTTGCAGTACATCT
AAGAGTGCTTTTAACGCTTGCTCGCAAAAATGCGGATTGGTTATCTTAGCTTGTGAAATA
AGAGAGAAAACTGTACGAAGACCTACTCCTGTGATCTTAGGCAATTTGTTGATAGGAACT
GGGGAAACACCTTCTTCATTGTCGCTGTCATCAGATGCCTCTGAAGAATTACTTTGGAGA
TTTCTCCAACGGGCCAATATGGATCGCCTAACCGTAGCATAAACAGCAAATTGAGATGGA
TTGCCCAGAAGAGCAGGTGCGTAGCATATTGTAAGAGTACCTCCAGCTTTTAGTCTGTGG
AACTTATCTTTTTTCCCAATTTTCTTATGAGTCTTTTTGTCATTTTTTCTTGTGCCACTC
CAGCATAAGGCTCTAAAATACTGTCTGTAGTTCTCGGGATCTATGCAGCTTAGCTCTGGT
GTTGGTACCCTGAGTGCCATGTTTCCAGTGAGATGATTTATGTCTGTCTATAAGATGGTG
ACATTTTCGTTATTTAACACACATATTCACTTAAAGTTCAAAAATGTCTTTCGACCAAGT
ATGTACCTGGATAGTGGATGGATACCTAGGTAGGTTCCTACCAGCTACCTACTCAACGTC
AAAAATCAATAACAAAATTGAGTGCTACCAGGAATTACGAGTTAAAAATGTTAGCTGCTT
CAGAA
(8045 bp)

- SilkBase 1999-2023 -