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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR28410_c0_g1_i2
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_MYCBP2-like_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008045 P motor neuron axon guidance
GO:0008270 F zinc ion binding
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0021785 P branchiomotor neuron axon guidance
GO:0021952 P central nervous system projection neuron axonogenesis
GO:0030424 C axon
GO:0032880 P regulation of protein localization
GO:0042177 P negative regulation of protein catabolic process
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0048667 P cell morphogenesis involved in neuron differentiation
GO:0051493 P regulation of cytoskeleton organization
Transcript
Level		FPKM:0.22 TPM:0.29
ORF EntryO_BomoN4EE10286_complete:A_BomoN4EE_TR28410_c0_g1_i2
Sequence
(Nucleotide)
TTATTATTTGTATATTAAAATTTTGCAAATCAAATCAATCGCGTACTTACAATTGAGATA
TTACATATACCTTTGGATCGTCAAGTCCATCCAGGCTGGCCAGAGTATAGGGTATGAGTG
TATTGATAGCTGGCGATTGTTGCAGCACAGAGGCATTCCTCTTGAGATCCTCGGCCGTAA
GCTCATTGCGCAAAGTACAAAACAGCTCCGAGCCCCTCTCCATTACTAAGGACGCCACTC
GTAATGTTATAGTACGAAGGGCGGTGACCAGAGAGTCAGTACTCTCCGAGCTGCAGAGCG
AAGTTGTAGACGAACGCGAATAGTAAACGAGGCAAGGTATCTGTCCTCGAGCCAGAGTAG
TTCCATTGAAGCTTAGAGAGCAAGAAGCAAAACGGAAGGTTGTTCCGTCAGGGCCCTTCA
CCGAAGGAAGACCGCAGTCACCATTGGCCGTTCGACCACCATGATTACATAGTCGTATAG
CGTAACGAATCTCTTCTTTCAAAAGTATTGGGCGGTCAAATTTCAACTGCACCATATCGT
GCTGACACTCGGCTCCACTGAAAGCGCCGTGAGCAACTTCGACGCTAACCCAACAATGAG
CAGGATTCATTTCTTCCGGGGACGACCGTGACTGCCTGACGTCGTTCAGCAGCTCGATCG
AGTATTCGTAGTTACCGGGGCCGCCGTAAACGCAAACCCCGACCAACATAACGCCGGACC
GATCGACGGTAAAGCATATAGCATCCGGACTTCCGTTGCCGGTGTTCCAGGCGCGCGACT
GATTGACGCGCATAAAACGCGAAGGCGTCACTAAGTGTTTCACCGAACTAGAGTCCACGT
CGTCCCTAATATTGGCAGTGCTGTGGGTAAGTTCGGCGACTATTCTGACGGTAAGTTTGC
AGCAAAACTCGGCGAGTCGTTCGTGTTGCTTGATCTCGCCGTGATCGTGAGGCTGGTTGC
AAGGACGCGTCATCATCTGACGCTTGATCGGAAGAAGTACAATATCGAGTAGTTTGGTAA
TCACATCCAACAGATGCCAGTCGCTGAAGTTCTGCTTCGTTTCAGTCGTCTCTTGAAACT
TCGGTGATTCCATATTTCCCGTTCTGGGCGGAATAGGAGGTGGCTTCTGGGCGTACGATG
ATCTAGGTACGGTCGCCGATTTCAATGGCATCTCTTTGATAACCACTTTACTATCGGGGC
GCTTATTCTCATGCGTTATGAGATAATTTTGAGTGACGGGAACTATGTATTGCAGAACAT
CTCGCAGACTCCTTGATACACACATCGCGGCACAAGTAGCCGTCAGCTCACGAATTTGGG
CAGGAGGCACTGTGCCCTCCTTTACATAAAATAGCAGGCTGCACATGTGGTTCCATTTTA
AAGTGGGCGTCGGAAAGAATGCGTGAAAACAGGCAGTGACCGTGTCGTGTGCCTCATTGA
AAACTGAATGCATCAGCTCCAACGCAAACTGAACATAGCAAACTCGACTAGACCTAATCC
TGCCCACTCGTCTTGGGATCCGAGAGCAAGTTGGGGTACAATCGGCCATTATCATTTGTA
TTAAATTCCTCACTTCTCCTATGGATTCAAAGTATGACATATACTCGTGCGAATTGCGTT
TTCTGTTGTTTTGAGGGTATATTTCGTTGATGTAGAACTTCACGAGTCTCAGACAAGACC
TCACCACGTACACTAATCGCTTTTGCTGCTTCATCAACAGCAGTTTTTGGTAGGTAATAG
GAATCTGTCCGTTCGTGTCCAAAATGAATTCTTTTAAAGATGCCCATCCCCAAGTTAATA
GTGATATTAAAGATCTGAAGCACGGCACTGTAACTTTCCTTGATATATTTTTACTGAGAG
GAATTATTGGTTCTCCCGGGTCGGTAATCCTCATTGGAAGATTATGATCGGGCGTTGCAA
TATTGTACAGGAGGCACGGTATCTGCCCAGCATTAACGTCGGTACCGTTGTTCGATTTCT
TTGAGGATTTGAAATGGAAACCGACTTCATCATTTATTACCATCGCTTGTCCCGAAGAAC
CACAGTCCGATGATGGACCGTTCATGCAAGCCCACGCCAAATACCATCGGTTTGCAACTA
TTGGTACTGGTGTTTCGAACAGTACCGGGAAACGATCCCTCGGCGCGCACTCGAATACAA
TTTCGTCGCTCTCGGCTAACAATTCACCATCAGCCTCTTGATCTCCGCCGTCAAGTCCAA
TGTCATATAACTTTATCTTCGCAGTGTAATCCCCACGACCCCCAAACAGCCCATAACCGC
CTAGCAATATATCGGTGTCGCACATAAACCGTATAGCTTCAACGGAATGTCCAGAGTATC
CCCACCCTCCGCCGTGGCTCTCGAAACGGTTCACGGTGAGGAAGTCCTCTTTCATGGACG
CCTCTGGAGCAGACGCGTTGTCTCGTTTACACTCCACTTGACTCAGCTTGTTATCGTGTG
CATAGTTCAGGGAGTCGAGACACGCGAGCAGATGCAGGACCGCGTGCATTCGTGTGATTG
AACACTTTGGCGCACACGGTATAGCCAGCTCTTGGCTCAGAACCGACATGTTCACTAGAG
CCACGATATCGGTCGGCTTCTCTTCATTACTGCATGTCACTTCGAAACTCTCCAAGTTCT
TGAAATCTTCCAAGCGCCTCATGTTTCCGCAGCTCGGATAATCGAAATCATTGTCGTCAT
CGTAACCGTCAGGGTCATTGTTGCAGCACCTCTGTATCTTGTGCGCATCGAATGCTAGTA
TGTTGTAACATCTTATCACTTGCACCTGAGGATGGTAGCACCACAGGACATCGTAAAGCG
GATCGAGGCACGCGAGTGTGTTTACAAAGTCGACTTGTTCTGAACCTGTCCAAGCATTAC
AAGTTCCGTCGTTCTTATTGATGGTCAGACATTTAAATGTGTGCTCCGGGCGATTCGGAA
GAATCAGAATACAGTTATTGTTGGAAGTAATGGTCGAGCTGAAAAGCGTATCGGTTTTGA
TGAGAGCTTGAGAGATTTGCACGAATGTTTGGTCCCCTGAAGCCGAAATCCAAACGGCCT
TGCATGAATACCGCGGACCCAGTCGGGGTACTCTCCCTGGGGTAGCGTACCATATCAGAC
CTCTCTCCGAGCGAGGCGCGTCGTCATCGCAAGGACGACCGAGTGACCCTTTCTGATAAC
TGCCAAAAGTGAAAAGTTCTCCATCTCTAGTCAGGACAGCAGTGTGATTACTGCCAGCCG
CGATGGCTGAAGCTTTAGGTACCTTTACTCGGATTATTCGATGATGTGTTGATATATCGC
CTGCGCCCAACTGACCAAACTGGTTTGAGCCGAATGTCAAGACTTCACCATGTTCGGTGA
GTAGCACAGTATGATGAAGCCCACACGCAACGGCCGCGACGCGGTGTCCTCCGGGCACAG
CCACGCGAGCAGGCGGAAGACAACTCACTTTGAAGCTGGTGTCTCTATCGTCTAGACCGC
TTGAATGTCCCTCGTATTGCGTATACCTCGATGGCTCCGGGTCATTCTTAGCTTCTGCTG
CGGTCGATGTCTCGGCGTCCGCGTCGTCGTCGGCGTCCGAGACACGCTCGGTACATTCGG
CGCGTCCGGCCGCGGCAAACGCGTCCGCACATCGACGGCAAATTCCACAAACGCTGCAGC
CGCTATCGCCTTCACCGCACCCACACTTTTCTCCGGGCACTCTGTTTGGTAAATGAGAGC
AATGGCACGCATTAGAGAATCCCGTGCACTCGCAGCAGAGCACGCACACGCGACAATAGT
CCGTCGTCCAGCTATGCGGCGTCTGGCATATGCGGGCTTCGTCTTTGTTCTCGTCATGAT
GACGAGAATGAGACGGTTTTTCTTTTGTATATCCAAATTCGCGACCGCACTGTCCCTTAT
TGTTTATACCAAGGGTATAGACCAGTCCGAAGCTCGTTAAAACAACTGCATGAGCTTTCC
CTAGCGCCACCTGTATGACTCGTTCGTGTCTGAGACCGAGAACTAGTCCCGACGAATCGC
AATGCAGGGTGTCTTTTCCGAACATTAGTAAGAGACCTTGACGCGTTACCAAAGCGGTGG
AGCCATAGTTACAAGCCGCATAAACTATGTGATGTCCTTCAGCCTTGAATATCTTTTTAG
GCCTTGTAGGTTTTGGTGTCCGTCGATGTCTGATCGCATCACCATCTTCTCCTCGTCTTG
CCACACCGGTAAACAAAGCCGTGCCGTTGTCTAGTACTAATATAGCGTGTACGCCCTCAT
GACCGACGGCCACCTGAGCAATTTTTGCTTTTTTTGCATTCGGCGCTTCGTTCTTCGTGA
CTGTTGTTTCTTTCATTAAAGTCCATTTTTTTGTGTTAGCAGATGCCGCTTTGTAACCGA
GACTACTGCCTTTGCCGCAGTAATATACCTTTCCTGATACAGTTGCTAGCAGTCCAAATT
CTTGTCCCCCACAAATACTCAAGAGGGGGTCGTCGTCATTATCATCAAGTTGTGTTGCAA
CCGGTACGTCCATATCAAGGGGCCGACGTGGCAGGATGTCTTCGAATGGCGCCCGACCCA
TTACTAACGTTCTACGCCTTAATAAGTGCACATTGAATTCTTTCTGTGAAGTCAAGATGT
TTGTTCCTTCCTGACGACTTGCAGTGTCCACACTATACATTCGTATCGTCAACGTGTCAA
ATTTTGTGAGTAAGATTAGCCCAATTTGATTGCCATCACTAAACACGGCGGATTTAGATT
CAATCGGTGCTGGTAGCCCTGGATCTAATTTGATTGTTTGTCGTACTTCTAGTGTATCTC
TATCTATTTCGTAGATATCAGTCTTTTTTCTACCAATTCTTACAAACAACTTAGTTCTAC
AATACCCAAGCCATCCATGTCGCTCACCCGCGAAAAAATCTGGTTTATAAGAATAAACAT
GTTGCTTTATAGAACTGCCATAACCAGAGCCAATCTTCAACAATCCTTTGGAAGTGAAAA
CATAGAGATAACAACCGTCCGATACAAGAGACCGTACAACTAGGTCACCCGAACCAGACG
TTAACGAAACTGGAAGATCTACAGGAAAACTGTTGATGAGCGACAGTGATGGTACACCGT
ACTGCAACCACTGGTTACGGGATGGAGAACCCAGAATAACGGACTGAACGCTTCGTTGTA
GCGTGGTCAGATTTGCAGGAGTCTTCAAGTATTGGTCTAAGTACAATGGAGCACACATTG
CCAAGGAGGCCGCTGCATTTAATATTAATTCAGCTTCGCCACGTGCGACTGACAATGCAA
TTAAACAAGAGCTGCTTAAAGCTGTGAGTTTTGAAGGATGTTCAGAACGACCACTAGGGC
TCACACCACTAGACACTTCAACTAGCATAGAATGTATATTAAAGATCATATCGGTTGGTT
CTTGCGAAAGCTCTTCAGGAGAATGCCCTTGCAGTACATCTAAGAGTGCTTTTAACGCTT
GCTCGCAAAAATGCGGATTGGTTATCTTAGCTTGTGAAATAAGAGAGAAAACTGTACGAA
GACCTACTCCTGTGATCTTAGGCAATTTGTTGATAGGAACTGGGGAAACACCTTCTTCAT
TGTCGCTGTCATCAGATGCCTCTGAAGAATTACTTTGGAGATTTCTCCAACGGGCCAATA
TGGATCGCCTAACCGTAGCATAAACAGCAAATTGAGATGGATTGCCCAGAAGAGCAGGTG
CGTAGCATATTGTAAGAGTACCTCCAGCTTTTAGTCTGTGGAACTTATCTTTTTTCCCAA
TTTTCTTATGAGTCTTTTTGTCATTTTTTCTTGTGCCACTCCAGCATAAGGCTCTAAAAT
ACTGTCTGTAGTTCTCGGGATCTATGCAGCTTAGCTCTGGTGTTGGTACCCTGAGTGCCA
TGTTTCCAGTGAGATGATTTATGTCTGTCTATAAGATGGTGACATTTTCGTTATTTAACA
CACATATTCACTTAAAGTTCAAAAATGTCTTTCGACCAAGTATGTACCTGGATAGTGGAT
GGATACCTAGGTAGGTTCCTACCAGCTACCTACTCAACGTCAAAAATCAATAACAAAATT
GAGTGCTACCAGGAATTACGAGTTAAAAATGTTAGCTGCTTCAGAA
(6106 bp)

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