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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR28393_c4_g1_i1
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_transcription_initiation_factor_TFIID_subunit_4_[Bombyx_mori]
Ontology
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0001092 F TFIIA-class transcription factor complex binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007517 P muscle organ development
GO:0008134 F transcription factor binding
GO:0022008 P neurogenesis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0048813 P dendrite morphogenesis
GO:0051123 P RNA polymerase II preinitiation complex assembly
Transcript
Level		FPKM:12.38 TPM:16.49
ORF EntryO_BomoN4EE10074_complete:A_BomoN4EE_TR28393_c4_g1_i1
Sequence
(Nucleotide)
CGCTGATTTGTAGAAAATGGCGTCAACGGAGTTTTTGGAGGAAGCTTTGTCCACAGACGT
CGACGAGAAAGCCGTGAACGCGATCGTGGGCACTCTCGAAAACCAATTAGTTACTAACGT
ATCGTCGGCGCCGTCACAAAATATTTTAGTGAACGTTTTATCATCTCAGTTTCCCGGGCT
AAGTTCGAACGCGGGCTCTATTATAAGTGGTCATAAATATACAACAGGCGGAGTTAGCTG
CGGTATTGCCACGAACAGTATACACAGACCCTCGTTGACAAATAGCACGTCCTGTAATAA
TGTCCAATCAAGTGTTCCTGGTACTTATTCCTCTTTGACACCGGGTGGTACTGTGACCAA
TTGTAACGATAACATACAAGTTATATATTCTCAGGCTCAAGCATTTTCTAACCCAAATTC
GGTGACATTTCCCGCTCAGTCACTTCCGAACGGTTTCGTTGGGTTGTCCTCGTCCCAAAA
TCATTTGATAACGTCAGTAGACGCGATGCAACCTCCTTTAGTTTTAAAACAGGGGACGTC
TTCGGGCCAAGTGGGAATACAGTCTGGAATGGTCACAGTACCGATGACAGCCAATTCAAG
CATGTCCGGTTCAATACCAAATGTAATGACTTTGAACAAACCTGGACAAAATGTAGTTGT
AACAACTCAGAACTTGGGTTCGAGTCAGCCCACAATACTCCCTAATGTTCAGATTCTGAA
TATGAGAGCTGGTGCTCCAGCAGTTGCGGCACAAAAGTCAGTAGCAACAGTATCACCAAG
AGTAGTGATAGGCACCCCACAAGTTGTTGGCACCAGAGCTGCAGGACCAGGCATAACGCT
GCAAACACTACCAAGTCTACAACCGGGCCAGCAGGGTCATTTGTTGTTAAAGACAGAGAA
TGGTCAATACCAGTTGCTGAGAGTGGGTCCCGCTCCAGCGGCCAGCTCTCTCACGACGCC
CCAGCCTCAAACCATCAGGCTGTCCACTGTGCCAGCACATCCTGGCGTCGCGACGGTGTC
AACAAGCATGGCCTCCAGCCCTATACCGGGTCAGATGCCAGCTGCGCCGATGGCAACGCC
TGTTATACCAGCATCTATACCAAATATAAACTGCGGTACGCCTCCGCCTCAATCTCAACC
CCCAACGGTAACAACTGTTAAACCTTCGGACAACACTAAGGAAAAATGCCGTAATTTCTT
AGCAAATCTCCTGGACTTATCAAGCAAAGAGCCTCCATCAGTGGAGATGAATGTACGGAA
TCTGATCCAGGAACTTATCGACGCCCAAGTTGAACCAGAAGAGTTCTGCAACAGACTTGA
AAGATTACTTAACGCGAGTCCTCAGCCCTGCCTTATCGGATTCTTAAAGAAAAGCTTGCC
ACTGCTCAGACAATCTTTGGTTACAAAAGAGCTTGTTATTGAAGGAATAAACCCTCCAGC
GCCTCACATAGCTTTCTCTACGATGCCATCTCCCGCCCAACCTGTGGTGGCCACGTCCAA
CATACAATTGCAGCAAAAACCACCATCGAAACCGGGCAGTACGATAGCGGTTCTACAGAA
CATTCCTGTGCACACCAAGATCAACGTTAGCAAAGTCAGTAGCGGCAAGTCGATGCAGTT
GAACAACAAGGGCGCCTTCCCGAGAGGCCAATTGCCTTCAGCTGCTTTATCAACCGTACT
GACTCCTGGCAAGTCGCTTCTGAAAGATAAGGAGAAGAAATCTTCTAGTTATTCGCAACC
GTTCACCGACGACAAGATGGCTGGCGATGACGACATCAATGACGTAGCGGCCATGGGTGG
AGTCAACTTGGCGGAGGAGTCGCAGAGGATTCTCGGCTCCACGGAGATGATCGGAACTCA
GATTAGATCGTGCAAAGATGAATATTTAGTGCCGACGAGCGTGATGCAAGCCAGGCTTAA
AGCCATAATAGCACGACACAATCTCGACGAGCCGACGGGGGAAGTGGCAGCCCTCATCAG
TCATGCAGTACAGGAGAGACTTAAAAATCTTATCGAGAAACTAGCTGTGATAGCTCAGCA
CAGAATCGATCATTTTATAAAGTCTGATAGCCGTTATGAAGTGACTCAAGATGTAAAGGG
CCAACTTAAGTTTCTAGAAGAATTGGACCGGGTCGACAAGAAACGCAGGGAAGACTCAGA
GAGGGAAATGCTTCTTAGGGCTGCCAAGTCTCGATCGAAGAACGAGGATCCCGAACAGGC
GAAATTGAAGGCTAAGGCGAAAGAAATGCAACGTGCCGAGTTGGAGGAGCTTCGTCAAAG
GGAAGCCAACTTGACCGCTTTACAAGCTATTGGACCGCGAAAGAAACCAAGACTAGAAGC
ACCAGGCGCCTCCGGAGACACAGCCACTCCTGGACCGCAGACTACTGGATTTCCTGGCCG
AAGTCAACTAGCCCTCCGGACTCGTCTGAAGCGCATCAATCACCGTGACATGCTATTCCT
GCTCGAGCAAGAGAGAGACACCTGCCGATCGTTGTTGCTTTACAAGAGCTACTTGAAGTG
ACCCGCGGCCGAAACCTACACTAGGAGCGACGTCGACCGTTACATCGACTGGCTCGCGAC
CAGATACGATGATTGAAAACGTCACGCTCCTACTGTAGCGTACGTGTGCACCGAAAGTGT
TACACGTGAGAACTGTCTAAAAATTTAAACGCAGTAAAGTTATTCCTGATGCTGACCGAA
TGAATTGGAGAATAATGTTCATACCAATGGAATGATGAAAGCGTTTTGTTATAGTATCCT
GATTTGTTACAATGCTGTATCATTGTGTACAACAGTATACAACAAATGCTGCGTCTTAGA
TGGCCGAGACTAATGAGTATTCAAATATTGACTTAATACCGTCGTGATGTTGTATTTGAA
GCAAGCCTTAATAATGATTCTAGTTAAACGGTGACTATGCGTAACTTGTTGAATAATAAC
TGATTCATAAATTTGAAAACATGTGCAACGAATAATGCAGCAGGTAGGTTTATCATTCGT
CTTTCGTACAAAGTCAAAATGCCTTGGAACTCGATTTTTATTGTATGGAGTCCTTGTTGA
TGTTATATAAAAATTTAATTGATATACAATAATAACTACATGATGGTTAAACTTGAGCCA
TTCAATACATTAAACAGTCGTTTGATGAACCGATTTTGGTCGATATGCACGGTATGACAA
ATAAAGTGATTGTTTTAATAATAACATAGAACTCTGGTAGAATTGATGGAAAGTATAGTT
GTTATAAGCGTTACGACATGTATTGAGACTAAGAAGATATTGGGCTAAGAGCAGCGCAGT
GACTGTCTTGGTAATGATTATGATCACCTTTCAGAATAAGTTGCCTCTCGAAGGAAAGAG
TACCAGAATAACTTATTCTAAAATTGTGAACTTTCGGGCTCCTTAAATTATATATAACTG
ATTAGTTAGGAGTATTCAGGTAATAGATATAACAAATGACATATCGAGGATATAAGGAAG
CGTGTCGGAGTGGAAAAAAGCAACTTGTGGTCGTCGTGGCTTAAAGGATAAGACATCTGA
TGCACTATTATCGAGCGATGCGATTGTGTCGGAATTCAAATCCCGCAGGCGTTTAACAAT
GTTTGTAATGATATACTTACTGAACCTATGTTCACGAATGACTTACATGATGAAGGAATA
ACCTGAGATGTGTAACCTGAGAATTATGTGTACTGGTTTCAAAGATGGCACAGCCATTAT
GTAATAAATTATACGTACTCTTATTTTAAGAGGTAATATTGATGACAATAATAATTAATG
ACAAAACTAAAGTCCACAGGGGGACTCTCAAGTTACTAAAAAGCCATTAACTATTTATTG
TTTATCAGTCCAACTATAGTAGCTAAGAACTTATGCACCACTCTGAATACAATTAAGAAT
ATTTAAAATATTAAGAAGCGTACAGAGAAAGGGGACAGATAATAGACATAGACTCGTGAA
TTATAATTTATAATTAAGGGCATAACGTGGGAGGAGCTAGAACACACTGCCCAAAACCGA
TGTAAATGGAAAAATTTGATTCGAGCCCTACACCCCAGCAGAGGGTAATAGGAAAGAATG
ACGATGATGAATTGAAAAAAATAAACCTAATAAAAAAGGTTTTTTTTTTTAAATTACTTC
GAGATACCAGTA
(4152 bp)

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