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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR28385_c1_g2_i4
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_Bardet-Biedl_syndrome_1_protein_[Bombyx_mori]
Ontology
GO:0001103 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001895 P retina homeostasis
GO:0005113 F patched binding
GO:0005119 F smoothened binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0006810 P transport
GO:0007601 P visual perception
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0034464 C BBSome
GO:0035058 P non-motile cilium assembly
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0043001 P Golgi to plasma membrane protein transport
GO:0045494 P photoreceptor cell maintenance
GO:0050896 P response to stimulus
GO:0060170 C ciliary membrane
GO:0061512 P protein localization to cilium
Transcript
Level		FPKM:2.60 TPM:3.47
ORF EntryO_BomoN4EE10018_complete:A_BomoN4EE_TR28385_c1_g2_i4
Sequence
(Nucleotide)
TTTAGCTACAATAAACAAGAGAAGAAATAAAACGCTTTATTTATTATAATACTACATCTT
ATTCAATTTTTTCGTTCTATTTCCCAATCGACAGCGTTATTCTGGTAACCGGATTGTATT
TTCTCGAATGGCAACATCATCGGATCGGTCGGAGGCATCTGAACTGTGGCCGCCAGTACG
GGCCTCTTCCTGTCCTCTTTCAGCAGTAACACTTTGACCAGCGCGCGGTCCCCGGCCTGT
CCGGTCACAGGACGAAAGAACACATCAGGATTTATGTTCTCCTCGAATACCTCTTCGATC
TTCGTTGGAAATTTTAATTTCCCTCCCGGAGATATTAACGGTACCTTAATGTATGGATTC
GTTACTCTGTAGTGGGCGGTGTGCGCGTGGAATAGTACCGCGAGCCCCGCTACCGCTCGC
TCCTTTGACTTGTTCTCCACGAAGAGCGTCACCCGGAACACGGGGCCCAGACCTTCAACC
TCAGCCGTCAGTCCTATGGGCTCCATGGCCCCGACTCCCATGAAATTCTCGGATTTGGCG
TGAGCATCCAGGAGCGTTCTTGTGGCCAGCAACCTCAATCTGTTCAATTCTAATTGAAAA
GCCTCGTGCATAGGGACGGCATTTTCTCGCTCCCTCGCCGATTGTTCTAGAAACAGTTTT
GATTTCTTCGGTATCAGCCAGGGCTTGTGTCCGGCGGCGGCGGAGGGCGCCGGCTCGACT
CCGGCCGCGCTGCTGTTGAAATCCGCCGTGCGCTTCAAGATCTTCAACATCAGGTTCCCG
CTGCCGGTCACAACGATGAGCACGTGCTCCTCTTGACCCAACCGACCGAACCTCATCACC
GAAGCGACATCTCTAACAAACAATGTGTCCAAACGCGCTTTCCCTTCATAGAAGTGGACA
TGCCCTGAAGTCAGCGCCACCCCCACTAAGGTGACTCCCAAATGCAGTACCGGCACCAGA
GTCATCGATATCGGCCTGTGCTCCAAGTTGACGCACCACTGCTTCTTACCCTTTTTGGTG
TAACATGACATCGTGTTGTCTGTACATATAACTATGATGCTTTCATCGGCGGTGATGACC
TCTATAGATATGATGTGTTCCTCTGTATTGAATAGTATGCGCCCTTCGGTGGATTCCCTC
TTCAATAAGCACACTGATTTCTCCCTGCGACAGAGTTGTAAATGTTTGGGGATCCAAAAT
AATAATGTAACCATCTTCTGTACCGACTACCAAACAACTCACAGAATACTGGTCTATTGA
GTTCATCTTCAATGTACTGATGCATGTGATCTCAGGAGGTTTCCACATAGGTAGTTCGGC
AGCTTGTTCTAGGTATTCCAACTGCTGGTCTAAGGTAAGAGCCAGGAAATTCTGAGATTG
CAGACTTAATATCTTCGGAGGAATAGCTTTTAAATTCTCTTGGAGTATTGTTATCATTTC
TGGTGTCTGATTTTCTGAGTTTATTAGCTGCTTCCAAACATCCATCTCGTGGACGCTCAA
ATCAACCGATGGCAATAGATATTTGTAAAAAAACTTCATATTTCTGTATAAGTATACTGC
AGAGCTGAATGCCACAGCTATAATTGGCATGGATCTTGGCATTGCCTCTGACGTATAGAA
ACCAACTATGCCAAGGGGTAGTTCTGGTAACAGGATGTCAGATGTTTGCATTGTTCCTTT
GAATACCTTAAGTTTAGGGCCCTCTTCGCCTTTTCCAAAATCAGCGACCAGTAGTTTATA
ATCTTTATCATTCTGCAGATCGACAAGAGCTAAATTAGACGGCAAAGTATTTAGATCTAT
ATCATCTGTACCTACTTCCACGTCCAACCAGCGGGACATACTGGTCATCTTAAAGCCTAA
CTTAGCTGAACTTAGGAATTAGCTTTAGAGTTAAATGTTTCAGTAACTGTGTGCAGAGTC
ACCAATTAATTAGATATATGTGCACAGTGTTTAAATACGTGGGATTAATTGGCCTTTACG
TGAGACTAAGGCGTTTATGTAGTTTAAACAATGTTTATAATTTGCAATGTTCTTTATGTC
TATTGTGTGTTTGTCACTTCCCCGTAAAATGTAGTGTACGTTAACATAGGCTAATTTAAA
TTATGCACTATTTAATAACGATACAGCTAAATACAAACAGGAGGAAATACAAACTCTGTT
GCTATGACAACCAAAGTTTTTCTCCCATTACGATAGCAAAAGAGCTGAGTTCTTCAAGTA
CAATTGAAATTCATTCGTTTACTTTAAACGGTTTTCCAGATCAACGTTCTTTTTATAAAT
TATGAATGCTTTTAAGCTTTCAATGA
(2306 bp)

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