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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR17424_c0_g1_i1
Scaffold_idBomo_Chr7
NCBI non-redundant
(nr)		PREDICTED:_putative_DNA_helicase_Ino80_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000790 C chromatin
GO:0000975 F transcription cis-regulatory region binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031011 C Ino80 complex
GO:0032508 P DNA duplex unwinding
GO:0040034 P regulation of development, heterochronic
GO:0045892 P negative regulation of transcription, DNA-templated
Transcript
Level		FPKM:12.00 TPM:15.98
ORF EntryO_BomoN4EE1264_complete:A_BomoN4EE_TR17424_c0_g1_i1
Sequence
(Nucleotide)
GTAGTCCGTACTGATATAGCTCTTTTAAATCACTCACTCAGGAACTAAAGGTACAACTCT
AGCTATTTTTAAAGAAATGTCAGTCTGCCCAGCTTCAGCACGTATCATTAAGAAATATTA
AATACCTACTAACTAGAAATACTGTGTAAAATGTAATATTAAAAATATATGCTCTTCCCC
GTCTTATCTTAGAAAAGTAGTATAACTTCTTCTAGGCGTAATATTTCCTAATTTTCAGTT
ATCCCAATGACTAAACTAAATAAGGGAAGGTCATCGTAAGTTTTGGTTCACGGCATTTAT
TGTTTCCCCGTATATTAAAGTGCAATGTCTGAAAAGCTAGCCAGGAATACAGTGCTGAAG
AAACATGAGGTTGCTAGGCCCGTACATATACAGCGGTTAGAGGCTGCACTGGATATACGC
TCGTTCGTTAGTCAAGTAGAGAGGATACTGAATTCTGATGATCAATCCGACAGCGACGAC
GATTCTAAATCTTTAATTAATGAAATATCCAGGAATGACCGAATTCTGCACGGTGTTGTC
ACAACGAAACAAGAACGACAAAGTGACCGACTTCGCCTCTACAATTTCTCTTCCGTTGGA
GAAGAAAGACAGTGGATAAGAGATGTTCTTCTCTCTTCTGAATCCGAAACAAGTACAGAT
GATGAAACGACAGAGTCAAAAGAGCTTAGATTAAAAAGAATATTGAAAGAAAGGAGATAC
CATAACAGATATGCTAGACGTTATTATAAAGATCCTACAAACACCCGCTACATGTACTAT
GGGGCTGGTGTTTTGTCTACTGTGGATCGGTACCCTGAACGCCGTGTCAGTCGACCCATG
CCTCAACTACCGGGAAGTAGAGGCCGTCGAGGTCGTCCATCTGAGAGAGGGTCTACTAGG
GGCTTTAGTAAATCTAGAAGGGGAAGACTTCGAGATGCACGGTGTAATGAAAGTAATGAT
TTGCCAGACGGAGTTGATTGGGAGGAACAGTTACGGCATCTGAAGGAAGAGAATGACCCA
GATGATTTTAGCATAGCTAATGATAAACAGGGGGCCAGGGGTCGTAAAAAGTTGTCGACA
TTGAAGAGTCCCGAAGCGCTAACAGCACGAAGGCGTCGACACTGGCTTTTACTCGTAAAG
AAGGAATTGGGTAAAGTACAAAGAGCAAGAGCGGCCACTCATAGAGAAGTTACACTTCAG
AGGAAAAGATTAGCTACTTTGTGTTGTAAGCATTGGCGGCATATTGCTATGCAGAGTCAG
AAGAACATGAAAGAGACGGTGTGGCGTTGCAAGCGGCTGAGTCGCGAGATGCAGGCCTAC
TGGCGCAGGTACGACCGCGCCGAGCGAGAGACCAGGAGGCGGATGGAAAAAGAAGCCGAA
GAACAACGCAAGATGGACGTAGAATTGATGGAAGCAAAGCGTCAACGTCGTAAGTTGAAT
TTTTTGATAACGCAAACCGAGCTGTACGCTCACTTCATGCAGCGGAAGATGAGCGCAGTG
GAGGACAGCGACACCGGAGCCGCTCATATACTCAGGCAACTGGACGAAGACCGAGATCCC
AGGCTGGCTTCTATAGACTGTTACGACAGCGAAGAGATGAAGGCGCGCGCGTCCCGCAAC
GCTCGCGAGGCGTTCCGCGCGGACCGCGCCCGCACCGAGCTGTTCGACGCGAGCGCGCGC
GCCGCCGAGCCGCGCCGCCGCGCCAGCGACCACGACCAGCCGCACATCTTCCGCGGGACG
CTCAAGGGCTACCAGCTCAAGGGAATGAACTGGCTGGCCAACTTGTACGATCAGGGCATC
AGCGGCATTTTAGCGGACGAGATGGGCCTCGGCAAGACGGTGCAGTGCATAGCGTTCCTG
TGCCACGTGGCGGAGCGGCTGGGCGTGTGGGGCCCGTTCCTGGTCGTGTCTCCCGCCTCC
ACGCTCCACAACTGGCAACAAGAGATGCAGAGATTCGTGCCAGATTTTAAAGTAGTCCCG
TACTGGGGAAGTCCAAGCGAACGGAAAATCCTCCGTCAGTTCTGGGAGCGTAAGGACCTG
CACACGCAAGCGGCCGCTTTCCACGTGGTCGTGACGTCATACCAAATAGTCGTCTCCGAT
CTCAAGTATTTGAATCGCGTGTCCTGGCAGTACATGATACTGGACGAAGCCCAAGCCATC
AAAAGCTCCGCGAGTATGCGATGGAAGCTCTTACTTGGGTTCAGCTGCAGGAACAGATTG
TTATTATCCGGCACTCCGATACAAAACAGTATGGCTGAGCTATGGGCTCTATTGCATTTC
ATAATGCCAACATTATTTGATTCACATGAAGAATTTAATGAATGGTTCTCCAAAGACATT
GAAAGTCATGCAGAAAATAAAAGCACTATAGATGAAAAACATCTATCCAGACTGCACATG
ATTTTGAAACCGTTTATGCTACGTCGAATAAAGAAGGATGTGGAGAATGAATTGTCTGAT
AAAATAGAGATCATGGTCCACTGTCCTTTGACTATAAGGCAGAAACTATTGTACATAGCT
CTTAAGAAGAAAATAAAGATAGAAGAATTATTACATTTCTCTGTGGGTGCTGAGTCCGGG
CACAATGTTGATAAAAATTTCACATCGAATCTGATGAATTTGGTTATGCAGTTCAGGAAG
GTGTGCAATCACCCCGAGCTGTTCGAGCGGCGCGACGTGAGGTCTCCCTTCACGATGCTC
CTGGACGATTACCACCTGCCGAAGCTCGTGGTCGAAGACTGCATCCTGATTCGTTCGACG
CCCTCAAAACGCCATCTCCTATACAACCGGCTGTCGATACTGACGCCGGGCCACGTGCAG
AGCGGGGTCGGCGCCGGCGGCTGCTTCGGCTTCACGCGGCTCGTGGACGTGTCGCCGCGG
GAGCTACACTTGCTGACGTCATGCGGCTGGCTGCACGCCATGCTACACATCGAGCAATGT
CTAGAGAAATACGAAAAACTCCGACACAGACAGGACTGGTGGTACAGCGAAAACATTAGC
GCCCAGACCACGTCTGATTATTATAGAGTTAATAGTAAAGACATGCTTTTGATATGTCCC
GACGGAGATGTGTTGAAGAAGAGAAAAGAAGACAGTTTGTTGTGGAAGGAGTTGCTGTTT
ACCGATCCGCTGTGGGTCGAAGGTGGTCCATTCTTCGCACACACGGATGTCGTATTGCAT
TACGTACCGGAAACGGTCGAGCATAGGACGATGCGTCTGAGGAACTTGAAAGATAACGGG
CAGTCAGATATGTTGAGTGAGATAAAGACAGAAGACGGAGGGGTTGTGGCAGTCAAGACT
GAGGAAATACCAGAATTTGAACACGTGGAACGGCCACCTGAAGTTTTCCCTGTTATGGCA
ACACCGATGCCCGTTTTCTTGTACGCTGCTCAACAGAAGGTCTGCGCGAGCACGCTGACT
CCGTTCGCGTCGTCGCGCAGCTTCGCGTACTACATGACGCGGCACCGGCACGCCGAGTGC
AGGGCGGGGTGCGAGACGTTGGGGCGGCTGTGCGCGGCGAGCAGGCCGCCCTACGGATGG
GCGACTATACAAGTACCCGATAAGAACCAGTTGGTGAGCGACGCTGGAAAGCTGACGGTT
CTGGACTCGCTTCTGAAGAGGCTGAAGGAGCGCGGCCATCGCGTTCTCATCTACAGTCAA
ATGACGAAGATGATTGATTTGTTAGAGGAATACATGTGGCATCGTAAACACAAGTACATG
CGGCTGGATGGCTCCAGCAAGATCTCCGCCAGACGGGACATGGTTGCTGATTTCCAGGCC
CGGACGGATATATTCGTGTTCCTTTTGTCCACTCGCGCCGGAGGTCTGGGCATCAACTTG
ACGGCGGCCGATACGGTTATATTCTACGATTCGGACTGGAATCCGACAGTGGATCAGCAG
GCCATGGACCGGGCTCATCGTTTGGGGCAGACCAAACAGGTCACAGTCTACAGGCTGATT
TGTAAAGGAACCATCGAGGAGAGAATAATGCAACGGGCCAGGGAGAAGAGTGAGATCCAA
AGAATGGTGATCAGCGGTGGCAATTTCAAACCGGACACCTTGAAACCTAAGGAAGTTGTA
TCGCTGCTGTTGGACGACGAGGAAATTGAACTTAAATATCGACAGAAGTCCGAAGAGAAG
AAGATGTTTGAAGAGAGAGAACGCAAGAGAAAGCTCGGAATCCTGCCCAGTGCTATTTCG
TCGCCGCCGGTGGAAGTGAAACGGCCCAGGGATTCCGCGTCGGAGCCCGGCAGCCCCCTG
CAAGTCGATGACGAGAGCGACGGTCTGGTTGTGGACGTGCCCTCGCAGCCCCCCACCCCC
ACCTCATACTCGCCGTCGTTCCGCCCGTCGTGGTCGGGCAGCCGCGGCAGTCGCGGGTCG
CGGCGCGGCCGCCCGCGCGGCTCGCGACACTGCGCCTCGCGCCGCCCGCGGCCCGCGCCC
GACAACAACGCGCTCGCCGCAGGAGCAGCGTTGTTGGAATCCGATGCGCCCCTCGAGCCC
GAGGTACCGGCGCCGGTCGAACCAAGTCGCGGTCGACGCGGACCAGGTCGTCCCCGGCTG
CGCAGTGCGGCGCCGCGTGGCCCCTCCCGCCGCCCGCGCCGCCCCCGCGAGCCCCTGCTG
GTGCCGCTCGCGCCGCCACCCTGACCGGAGCGTCCGGTGTCGGATGAGGGTTCGCTCACT
TCCGGCTCCTGTCCAAACGCGGCCGCCCTCCCCGGCGACAGCTTAATGAAATGATGTGCT
CATAAATTATAACTTAACATATCCTGACTTGTTGTATTATTGGTATTGTGATCAGAACGG
TAGATTAGTAAAATGATGCGAGAGATTTGCAACATGCGTAATGAACTTGATACCAGAACT
TCGATATGAACTTTGTTGTTGACGCTGTTTGAGTTGAATATTCTATTAAATTTATGTTAC
GTAGTTAGAGGTCATAGATGTCACAATGCAGCCACTGGATCTGAGAGATGTGAGCTCGAA
TTTTCACTTACACGAGTAAGATTACTTGATTGAAAATCAATATATTAAGTAAATTGTGTT
ATAAAAAAAAATCTAGTTAATATAGACTAATTTAAAAATCTAATTTAAATTTTTTTTTAA
AAGCTCACCTTGGTTATTTTTTAATAATTAATTGAAAGCGTCATTGCTTTTCGACGTAGT
GACGTCATCAATGGCATAAAAAAGTGGTAGGTAGCCATTGCCTATATCACCCGTTCAATC
TCTGTAAAAAATATCTCTGAAAACATGTTTGGATTGTTATAGACCGCATAATATAGTCTT
AAAAATATTCAAGTCATGACTGCCTTCATGTTTCGAGTCGAAATGAGAAAATTGTTTTGA
GGTTATTATTAGGAGTAAAACAAAAACTCATTTTTTTTAAGAGATTTTATGACCTGGTAA
CTGAGACCTTTAAGTCATGTCTTATTTTA
(5429 bp)

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