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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR17141_c0_g1_i1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		SoxE_[Bombyx_mori]
Ontology
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001649 P osteoblast differentiation
GO:0001701 P in utero embryonic development
GO:0001755 P neural crest cell migration
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0007283 P spermatogenesis
GO:0007422 P peripheral nervous system development
GO:0008134 F transcription factor binding
GO:0008584 P male gonad development
GO:0010628 P positive regulation of gene expression
GO:0010817 P regulation of hormone levels
GO:0014015 P positive regulation of gliogenesis
GO:0033690 P positive regulation of osteoblast proliferation
GO:0035914 P skeletal muscle cell differentiation
GO:0043066 P negative regulation of apoptotic process
GO:0043565 F sequence-specific DNA binding
GO:0044798 C transcription regulator complex
GO:0045165 P cell fate commitment
GO:0045444 P fat cell differentiation
GO:0045662 P negative regulation of myoblast differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046533 P negative regulation of photoreceptor cell differentiation
GO:0046982 F protein heterodimerization activity
GO:0048469 P cell maturation
GO:0048484 P enteric nervous system development
GO:0048709 P oligodendrocyte differentiation
GO:0060009 P Sertoli cell development
GO:0060018 P astrocyte fate commitment
GO:0060041 P retina development in camera-type eye
GO:0060221 P retinal rod cell differentiation
GO:0060612 P adipose tissue development
GO:0061138 P morphogenesis of a branching epithelium
GO:0072034 P renal vesicle induction
GO:0072197 P ureter morphogenesis
GO:0072289 P metanephric nephron tubule formation
GO:0090184 P positive regulation of kidney development
GO:0090190 P positive regulation of branching involved in ureteric bud morphogenesis
Transcript
Level		FPKM:11.11 TPM:14.80
ORF EntryO_BomoN4EE1240_complete:A_BomoN4EE_TR17141_c0_g1_i1
Sequence
(Nucleotide)
ACTCTTTATAGTGTGTGCGCGCGAGTCGACCGCACGCGCGCTATTCACGTTCCATCTAAA
TTTCGGTGCAGGCAACTCGATAATAAATATATTCATTTTTTTTTTCAAATAATATACCGT
TCTATCGTTGGAAGTGACCATGAGTTGGGGCCAGGAGCGCGACAGGTCCGGGGACAAGCT
GGAGATAAACGAGGCCGTCGGAAAACTCGTGAAAATATTTGACTACGATACAATACTGCC
GCAACCAACGAAAGGTGGTGGGTGTATGCGTCGTCCACACGTCAAGAGACCGATGAATGC
ATTCATGGTGTTCGCGCAAGCGATGCGCCGCCGTTTGTCGGCCGAACGACCCTCCCTGCA
CAACGCCGAACTCAGCAAATCATTAGGATCCATGTGGAAAAATTTAAGCGAAGAGGAGAA
GCTGCCTTTCATTAAAGAAGCAGATAAGTTACGAACGCAACATAAAAAACAGCACCCGGA
TTACAAATACCAGCCTCGACGTCGGAAGCCGCCGCTAGCTTCAGCTTCAACCCCGAGAGT
CAAACGGGAATCATCTCCTGATCGAAACCACATAGATTTCTCGGGCATGCCGGAAATATC
CGCTGCTTTACTAATGGACGGCCCACCGGACGGTACCGAATTAGACCAGTACCTCGAGCC
CAGACCGGTGCCAAATTACCACGAGCTACAACCTCGATACGGAACGCATACACTAACGCA
CCACGTACCGCCACCTCTATACGGTCCGGTACCGTCCCATCTCCACCCGCCCTGTATTGA
TTGCCCACATTACGTTGATCACCCCTAAGCCTTTTAGTAAATTCAATCATCGGAACTCGA
TCAGTGAACGGTGATAATATCTGCGAATATTGTGGGCTGATAAACTATATCAAGCCCGTC
CAAGACTTTTTGTTAAGTTGTAAAATAGGTCACGTAAGCTGTATATAATATAAGTAGATC
TATTTCGCCATACGGTTCCTTCGCGCGCACGTGCGTTTAATCTAGTACTAAATAAACATA
CGGGACTTGCAATGAATTATCATTTCGAGTGTAATAATAATAAGAAGTTTTTGTGCGATT
CGTGACTTCTAACCGCCGCTACAAATATTTTGAATCAACATTACGCTTGGCACTGAGGAA
TTACTTATTACTAGTGGTAGGACCACTTGTGAGTCCGCACGGATAGGTACCACTGCCCTG
CCTATTTCTGCCGTGAAGCAGTAATGCGTTTCGG
(1234 bp)

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