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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR16322_c0_g1_i1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_calypso_isoform_X2_[Bombyx_mori]
Ontology
GO:0000790 C chromatin
GO:0003682 F chromatin binding
GO:0004843 F thiol-dependent deubiquitinase
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0035517 C PR-DUB complex
GO:0035522 P monoubiquitinated histone H2A deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
Transcript
Level		FPKM:22.17 TPM:29.53
ORF EntryO_BomoN4EE1177_complete:A_BomoN4EE_TR16322_c0_g1_i1
Sequence
(Nucleotide)
GTCTGTGTTCCCAGTGCCTGTCCAAAACACGAATGGCAAAAATATGCAATTAATAATAAT
TTACGCAATAACATTGTTAGGGTGGGAAAAGGGCAGAGATTTGGGAACAATAAAACTATA
AAACTAAATAAAACAAAAGACTCGACGGCAATAAACGTAAACAATAACCATTGTTGAATG
AAAAATATGCCGGTAGAACTAAACAGTCTTACCGAAGGCTGGCTAGAATTGGAAAGTGAT
CCTGGTCTTTTTACTTTACTATTAGAAGATTTCGGTGTTAAAGGTGTGCAAGTTGAGGAA
ATTTATGACCTGCATAAGCCTTTAGAGAGCCCGGTGTACGGATTTATCTTTTTATTTAGA
TGGATAGAAGAGCGCAGATCAAGGCGAAAATTCGTTGAACAAATTGAAAGCTTTGTACGG
GATGAGGAGACCATCAATAATATTTTTTTTGCACAGCAAATGGTACCCAACAGTTGCGCC
ACTCATGCTTTACTTTCCATTTTACTAAACTGTCCAAATCTTCATTTAGGAGAAACATTA
AGTAGGTTAAAACATCATACAGTGGGTATGAATCCTGAAAACAAAGGATGGGCAATAGGA
AATACACCTGAGTTGGCTTGTGCCCACAACTCACATGCCATACCACAAGCACGCAAAAAG
ACAGACAAAAATGCTGGAGTTTCTACTGGCAGATTTACAGGTGAAGCATACCATTTTGTT
AGCTTGGTACCAATCAATGGACATTTGTTTGAACTAGATGGTCTTAAACCATATCCTATG
GATCATGGTCCGTGGGCAGCTGATGAGGATTGGACAGATAAATTTAGAAGGGTAATGGCA
GAAAGACTTGGTAGAGATGCAGGAGAACAAGTTCATGATATTAGATTCAACCTAATGGCA
GTTGTACCAGACAGAAGGTTAGCATTAACACAAAAGCTTGGGGCACTTGAAATAAATCAG
AAGAGAGTCAAAGAAGCTATTTCAAAAATAGGGAAACATCTACGGCATTTGTTGGGGAAA
GGCAGAGAATACAACGGTCAGAGCGAGCTCATAACTAGCAATGATATTGATACATCTCTT
AATGATAGCATGGTCCACATTAGTGAAGAGACAATATTAACAGCATTGCAATCATCACAA
CTACGCACATATGACATAGATTACACACTACCAATTACAATTGAGATTGGTGCTATGGAC
AGACCTCATCAGGATAGCAGTATTTTATTAGTGGATCCTGTGGAACAAGGAGCTGTTGTG
AAATTCGTTACAGCAAATAAAGATAGTCAAATCATTGGTGATATCTATCCAACATCAACA
ACCGCCCTAGTGAGAAGTAATGAATCACCAGTTCTATTGTGCTCCGAAATAGCTCCGGAA
CAGCCCTATAAGTTGAGGAAATTGCTCCTTTCTCATTCGGAACTTAATGCGCTAATGAGC
TGCATTGTCGGTGAAGTGCAATCGTGTCAGCAGGCTCTAAACGATGAGAACGATAAAAGA
GATATGTATAAAGTAGACGATTGTCGACGTACGCACAACTACGACGAGTTCATCTGCACT
TTCCTATCGATGTTGACGGAACGTGGAGCTCTGGCCGAACTGGTCGCCGCGCAGTTAGAA
CGAGGCCGGTCTCCGAGAGTGAGACGACGACGTCCTAGACCCAGACCCCGAGCGCGACCT
AGACCAAGGCCACGTGGAAGAAAATAAATCGCATAACTTTCCCAATTGTACCACCAATCT
TGTCCCTTCCCGCCAATATAGATTTTGCAAACAATATGAAGTTGCTATGTTTAAAGTTAC
AATAATTATAATACCGTCCTGGGTATGCTTGAGATTATAGAAGTTGATCTTCTATGTGCT
TTTTCATTGTAATTCTTAGATTAGCTTTCGCAATTCACAAATCCGATGTACACTCGAAGC
ACTAAGGATAACTAGTAAATAAAACAAGTATTAAAAACGATTTATTCTTTATTTAAACTA
CGAACAGCGCCATATTTACATGGTATCATATTGTTAAAGAAATGTAACAACAACAACTCG
TTAGATTAGGCACGTGATCATCGAACAACATTCTTATATTTAGATAAATACAGCGCGATA
CACGCGCACTCCCAGCGACCTGCTATATATGTATATACCCATACATTAAGTAGAATAATC
ATTTTTATAATGAATGATGATGAAATTGAACGAGAAAAGAAACTTAAACAGGAGTTATTT
TTTATAAAGGTTAGGAATAAATAACAGAATACAATCCGCAGAGACGCAAGTAACGATCGT
AAGGTTTTAAGGTAAAGTTTGTATTTCATTAATGAAATACACAACAATAAGTCCATATCT
CAACACTTATCTAAATTTAGAAGATTTCCCCGGACAAGATTTGTTGATTTGACGTCACGA
ATATATTAGATGTAAGGAAGTGTTTGATTAGTTTAGTAATTAGCATTTGGAGTTTGATAT
GATTATAGCATGAAGCATTTCGATGATAAAATCTTCTATATCACAGACTAACAAAAATTT
ACGACTAAAATCACTACATGCTTATAATATGGCACTAATAACTAAACCAGAATATAATCT
GTAACAATAGAGGCAGTTTTATTTATCATTCAGAAACGCGTACATACTCTTCATCGATAA
TTGTAATTTAAGAAAATCAAGGGACAAAGATAATGTTACATTTCAATGACAATATAACCA
AATTTCTACTATTATGGATGTTTCAACAATATACGTTTATAATAGAAAAGAAAATAATAC
TCGACAATAACAATTCATAATAAAATCATTTAGGGTTAAATCGGCAGTAGCACCAGTGGC
CATTATGCACAGGCCGCAGGTTCACAACCAAAACTTATGGCTATATCACTACTTAAAATT
GCACTACATTTGGTGACCATTGAAATTATAAATCCCGAAAGCATAAAACCAATTATTAAT
AAAACTACGCCTGCCAATTTCGAACGTCCAACTATTGCACGTGGCGACAATTCATTCAAA
AATAATTCTTAATTATTTGTTCAAACGATATCCACAATATATATTTTTTTCTACTAAATA
AAAATCTACATCAAACATCAGCACACTATTCGCTACCGCATACATTCAAATATAAGGAAC
AATAATATCTGTCAATCGGTTAAAATGATAACGTACATAGCAACATTCGACGAGTGTGGG
GGGGAGTCGGGGACCGGAGACGAGCGTCTCGCGACCGACGGGACGGCGGCCCCTTCAACT
GGCCGGCGCCTCCTTCGTGTCGCCGCTCGCGGACGGCGCGCCGGAATTAGATTTCTCGTC
GTCGACTTCTCCGCCGAGATCGGTCAGAGTTCCAGGAACGGGCAAATCCTTCAGTTGTCT
TTTCTCTATCTCAGCTTTGAACTGCTCGATGTCTTGCGGGCTGATTTGCACGAAGAGTAT
ACCGTTGATGAGGTTGAGCATGTCGATGACGGAGGCCATGCCGGGCGGCTGGATGTGCAG
CGGCGCGTGGTGCGCGTGGTGCGGGGCGCGCGCGTACGCCTCCGCCAGCCGCTTCTGCAG
CACCACCGCCTGCTGCGTCAGGTGACGGAGACACTCCGACGACTCGCGCGTCTTCTCGTG
CTTCTCGCCCAACAGATGCTTATAGATAGAGTAGGTCTCCTTCTCGTGCGCGAGCGCCGC
CCGGAAGTCGCCGAGGCAGGAGAGCGTGCGCGCGAGCAGATGGCGCGCCACGGCCGCCTT
CAGCGAGCGCGGCCCGTGCGTGCCGCTCGTCACCGCCAGCCCGCGCTCCGCGAACCGCAG
CGACAGCTCGTACTCGCCGACCGCGTGCAGGATCAGCGCGATGTTGCTGTCGAGCAGCGC
CATCTCTGGGTGGTTTTCGCCGCAAACGATCAATGCCAAGTAGCGGGCTCGATACAGTAG
CTTCAATGCGGTGCTCACTTGACCGTTGGCAAAGCAGTATAACGCCAAATGTGAATATTC
TGTAATAGTGTAAGGGTGATCAATGCCGTTGACCCTCTCGGACATAAGCACCGCCTTCTG
CTGGTAGGCCATGGCGTCCCGGTGCTCGCCGGTGACGTAGCACAGGCGCGCCACCATGCG
GAGGCACTGCGCGATCTCGCCGTGCATGGCGCCGTACACGTTGTTCAGCAAGTTCAGAGC
CTCAGCGATCAGTTCGTGACCTTCGGACACGGCGCCGGCTTGGATTTTGTTCTGACCCGT
CGTGTAGAAATTGTATGCGTCTGAAGCGCGTGGATTGATATGTTTAACGACGGGGAAAAT
ATTCATAATGTCCGCACTTGCAAACGGTGCCTTGTTTTTATTGTCAAAGTCGTATTCTCT
TAACATAACTTGCAAGCCTACTTTTAGTGCGAAGGACCTGAGAAGTGATATTTTCTGAAT
ACTGTGTTTTTCGATTATAGATTCCATGTTCTCGGCATTAAGATCATATCCCCAATACGC
CTTCAACTCTTGTTTAATCTGTGCAAAGAGCGATTTGGGCGTGAGGTTCTGCCAGTCGGG
GAGCGGCGAGGCGGCGGGCTGCGAGTGCGCGTGCTTGCGGGAGCGGCGCCCGCGACCCCC
GCGCCCCGCGCCCCGACCCCCCGC
(4584 bp)

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