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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR1172_c0_g1_i1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94-like_Protein_[Tribolium_castaneum]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004190 F aspartic-type endopeptidase activity
GO:0005524 F ATP binding
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.59 TPM:0.78
ORF EntryO_BomoN4EE50_5prime_partial:A_BomoN4EE_TR1172_c0_g1_i1
Sequence
(Nucleotide)
AAGTGCTCGTTCCATGCTTTATGCTCGTAAAGTACCACTCAATCTTTGGGCAGAAGAAGT
AAATTGTGCTGCATATTTGCTGAACCGCCTGTCTTCAAGTCAGACACCAAATATTACACC
TATAGAGTTGTGGAGTGGTGTTAAACCTAGTCTAGATCATGTCCGAGCGTTTGGATGCGA
AGGATATGTTCATGTGCCAGATCAGTTGAGAAAGAAGCTTCATAGTAAAAGTTGTAAAAT
GATGTTAGTTGGATATGATAATTCAAAGTATAGAATGTATGTTACAATTACAAAAAGAAT
TACAATATCAAGGAATGTTATTTTCAATGAACAGAAAAGACTTGAAATTAAACGGAATGA
AGCTCAAATTTTTATATTGAATGATACTAAACAAAATACTGAAGAGGAGATAGATAACAC
TGAGTTGACTGAAAGTGATGACAGCTCACATAATACCATTGATGAAAATGCTGAGACCTA
TGAACTTTCATAAGAAATTGACCTTACGGACATGGATCGTTCAAATATTAATTTGCGACC
ACGTAGAAATAACGTTTTTGAGGCAAATTTAATGGAATTGGATGTACCTCGCAGTTACAT
GAAGCGATTAATAGAAAACAGAGTGACTTGTGGCTTGTGGCCATAAATGAAGAATATGAA
GCTCATCGTACTAATAACACCTGGAGTTTTGCGAATAATGAAGACCAGAGAACTATAACA
CCCAAATGGGTTTTCAATATTAAAAGAACCAAAGATGGTAAAGTAAAAAGATATAAAGCT
CGTCTTTGTGCCCGCGGTTTCACACAAATTGAAAATATAGATTTTAATGAAATCTTTTCA
CCTACTACAAGGTATGAGTCAATAAGAATACTGTTGTCTATCTGTGCTGAATATAGAAGA
GTATATTTTTATGGTAGTTCCATATGGAGTGAACGCACCAGCAAATAAAATATGCAAATT
GAATAAATCCAAATATGGCTTAAAACAGGCATCTCGTTGCTGGAATCAAAAGTTTACTGA
TTTTCTGTTAAAAGTTTGGTTTTGTTCAATTGCGGGCAGACAATTGTGTATTTGTTGGTA
ATTTTAATGGTATTAGGCTTTTTTAATATTATATGTCGATAATGCTCTAATAACGTCACA
ATCCAATTCAATATTGGATCAAATTGTTAGTTTTTTTTTTATTGCTTAGATGGTTGGACG
AGCTCACAGGCCACCTGGTGTTAAGTGGTTA
(1231 bp)

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