SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR10684_c0_g1_i1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_ETS_translocation_variant_5_[Bombyx_mori]
Ontology
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007274 P neuromuscular synaptic transmission
GO:0007626 P locomotory behavior
GO:0030154 P cell differentiation
GO:0034599 P cellular response to oxidative stress
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045666 P positive regulation of neuron differentiation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048133 P male germ-line stem cell asymmetric division
GO:0050807 P regulation of synapse organization
GO:0060252 P positive regulation of glial cell proliferation
GO:0060762 P regulation of branching involved in mammary gland duct morphogenesis
GO:0071340 P skeletal muscle acetylcholine-gated channel clustering
Transcript
Level		FPKM:0.34 TPM:0.45
ORF EntryO_BomoN4EE867_5prime_partial:A_BomoN4EE_TR10684_c0_g1_i1
Sequence
(Nucleotide)
CACACGCACGCGCCCCCGCATCTGTACCGGACGCACACGCACGCGCCGCCCGACGGACAG
ACCCAACCTCACGCGTGCAAGAGTGACGGCGAGGAGACCAGGCTGGACTACAGAGATCAG
TACCTACACAGATGCGGCATCCCGTTCAGTAAATGCAATGAGGACGAGGAGGCGAGGGAG
GAGCCGGTCTCCAGCTCCGAGCCCCACCACCGCTGGGACGAGAAGCTAGTAAGCAGCTCG
CTGTGTGCGACGCCGCTCGCCGTGTCGAGCCGGACCGACCCCGCCAGCCCGCAGCACGTC
ACCACTACACATTCAGGCGGGCGGCGCGGCTCGCTGCAGCTGTGGCAGTTCCTGGTGTCG
CTGCTGGCGGAGGGCGCGCGCTGCGTGGCCTGGACCGGCCGGGGGCTCGAGTTCAAGCTG
CACGAGCCGGAGGAGGTGGCGCGGCGCTGGG
(451 bp)

- SilkBase 1999-2023 -