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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR101535_c0_g1_i1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		PREDICTED:_tetratricopeptide_repeat_protein_21B-like_[Bombyx_mori]
Ontology
GO:0000790 C chromatin
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007224 P smoothened signaling pathway
GO:0008589 P regulation of smoothened signaling pathway
GO:0021591 P ventricular system development
GO:0021798 P forebrain dorsal/ventral pattern formation
GO:0030991 C intraciliary transport particle A
GO:0035721 P intraciliary retrograde transport
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0042995 C cell projection
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
GO:0072372 C cilium
GO:0097542 C ciliary tip
Transcript
Level		FPKM:12.80 TPM:17.05
ORF EntryO_BomoN4EE51668_complete:A_BomoN4EE_TR101535_c0_g1_i1
Sequence
(Nucleotide)
AAGCGAATTTGAGGACGTGAATTGATATTTAAAACTTCACGTTTCATTTTTTCGTTTCAT
CGAGTTTGAAATCACACCCAACGATTCTAAAGAAGTTTCACTTCAAAAATTTACAAAATA
CTGTTACATTTCTACATTTCGTTTAATTCACGTCCTCAAATTCGCTTTAGCTTTCTCTAA
AATCTCCTTCTTGATCTTCGGATAGTCGGGATGCACCTTCAGTATGTATCGCGATACGAT
TATACATTCGGGGTACTTCTTGAGTTTCAAATAACAATGCGCCAGCTTGTAGCCGACGGA
CAGGTCGCCGCGGCCGGCGTGGCTCCACGCGTTGTCGTAGTTGTGCGCCGCGCTCTTGTA
ATTCTGCTCCTTCTCCGCTATTTGACCTAGATATTGGTAGGCTCTAGCACAAGAGTTGTT
GTGGTTTAAGATTTTCGTGAGCAGTTCTTTGGCAGCGTCCGTCCTTCCGGAACTTATCTG
TCCCTCAGCCACTTCCAGCCAGCATCTTTCAAGTCCATCGGCCTTCTCTGGCGACCACAC
GATGGACGAAATAGTTCTTTTGAGGATATTCTTCGCACGCGTCGGCTGTTTGGTTATATT
GTATGCATTAGCGATGGCCAGCACGACGTAAGGGTCGTCCTGGTAGCCGTCCTCAGTGAC
CAGAGGTAGCAAGTCTTGCAGTACCCGCTCCGCCTGGCCCTTGTTCTTGGTCGCGAGCTG
GAGGAGCGCCTGCAGAGGTTTACGTTCAGCCGGATTCACTTCGACGAGAAGCTTTTCGGC
AGTCCGTAAAGCTAGTAGACGCGTGTCAGCGTCATCAGCGGAGGCGGCGAGGTTGTCCGT
CGGCGGCAGCGGCGCGTGCTGCGACAGACACAGCAGCACCATGCGCGCGGCGGCCGCGGC
CCCCCACCGCGCCCCCCCGCGCGCCGCGTTCAGCGCCCGTAGCGCCGCGTTGCACTTGCC
GCCGTACGCCGCGCACACGCCCGCGCAGTACTTGTAGCCCGGGTCGTCCGGATCGTCGAG
GTGTTGCTTGGCGAGTTCCAAGGCCTGTTCGGCCTCGCTGAGTTTCCCGCGTCTCCACTG
CACCTCGACGAGCTGCGCGAGAGCCTCCCAGCTCGTCGGCTTCACCGATAAGATCTGGTT
CAGGTGCCGTTGGGCTGTTTCTAGATCCACCTTACGAAACGCCAGGTCTGCCATCATGAC
TGCCGCGGATTCATTATTCGGATCCGCGTTCAATAAAACTGCGCAAGTTTGTTCGCACTT
CTCTGGATTATTCATCTGCGCGTACAGTTTAGCTAGGGCCAACAGAGTGCTCGGCTCGCG
GGGAGTATGAATTAGGGCCTCAGAATACAAATTTGCGGCGACAGCCGGCTCCCTCATGCT
TTTGAACTTTGCCAAAGCGCACAATATGTTCGAAAGCTGCCTCCTCTCCTCCTGCAGATC
CGCCTTCGAGTCTATCTCTAGTCTTTTGACGATCGATAGCTGCAATTCTTTTGCTTCGGC
TAATATTAAATTGACGTTTCCCGGAGTCGGAGTTTTCAGTTCTCTACATTTCGCCTGCTT
AAGTAGCAATCGGACACGGCGCCTCAGTGTTCCGATGTCTTTCTCTTTATTGTACACCTG
ATTCAGCTCCGAAGATATAGTAGTGTCCGCTTTATCGTATTGTTTTAATCTGATGAGTAG
ATCGAGATATTCAAATTTAAGTTCGTCGTCGTTGAACGTTTTTATCGCGTTCTCATAGTG
CTGCACGGCCTTGTCGTATTCGTGCATCTTGAACAAAGCTGCGCCGAGTTTCTTAGTGAG
CTGTAGGTCCCCGAGGTTGCCTCTCAGGGCGGTCTCGTATGACTCCACCGCCTGTGCTGG
ATCTTGAATCGACATAAAAGCATCTCCCATCATCGTATGGGCATCTGTCATTGGATGATT
ACTGACAATCTCTTTAAAACATGTTGTGAACATGGCTCTGTCTTTTTTATTTTTCAAATA
AATATGAGCCAGTTTGCTGTGGGCTTGAAAGTAATATGGCTGTCCGGGCTTTATTTCATT
TAAGATGTCAATTGCACTGTCAATATCCCCTTGATTCAGAGCCAAGTCAGCACGTGATAT
TAACAGCCGAGTTTCTTCTGATGTATATGAAAATTCTTGAATTGCTTCCTGCATGGCTTT
GCCCGCTTCCCCAATTTGCCCTAAAGCTGTGTGTATCTCAATGATTTGTAGATACAAAGT
AGCTTTATCAATAATGTTCAAGTCTGAATCAAATGTTCTGCTCATGTTGCTCTTACTAGT
TGCTATCTGAAGACTTGTCAAGAAGCTTGACAAAGCATCTTGTAATTTGTCTTTGCTTTT
TAAAACTATTGCATTTATAAAATGGTACATTGCGCTATCTCTAACTTTGAAATTGTAACT
CAGACAAATTTCTAAACATTGTTCAGCTTTAACATATTCTTGCTGTTGTATATAAATTTG
TGATAGTAAAATCTGACTACCAGCATGTGTATTGTCCAACTCAGCGATTTGTTGAGCAAT
TTTTTCAGCTTCAATGGCATATCCGAAAAGAAATTTCAATTTAGCCAATTCAAATAAGCC
TGGTATCAAACCTGAGCAAGCTTCACAAACAGCATTTAAGATTTTAAAACACTGGATTAC
AACAGGGATGTTTCCTTCTTGAGAATAAAGCAGATACCCAATGATAACAAACGGCTTCTT
TGGTAAATGCTTTTTGTACTCTTTGTAAATTTCTAAAACAAAATCTGGGTCTAAGTCCTT
AATGTAAATTAAACTCATGGGATTGCGAGAGGCTAAATTTAATTTTGTTTCAAAGGCTGT
GTTTAACAATGGTACTGCATTAGATGAGTTCTTGATATTTAGTTGGGCAGACAACATGTA
TAGAAGTGGTAACTTTTCTGTTCCTTGCATCTCAAAAAGTAATTCAATTTGTTGGGTTAT
TTGATCTGTCGGACCATTCTCTAACATTTGGCAGAGAGTCAATCCACATAGTGCTGTGAT
GGAATTATTATCCAATTTACTTGCAGCTCTAAAGAAACTCAGTGCGTCTTTATATTTTGC
CTGAAGGATACACTGGTAGCCAACTTCACTGAGATAGTCAACATTATTTGAATACATTTC
TGAAGCATACTGGGCAAATCTATAAGCTTGAGACAAAACTGCACTTGACCTCCCACAAAT
TCTAGAAAAGATTTGAGCAGTATAGTAAAACTGATGTCCATTATGGCTTTCTTCAATTTC
GAGTATACCAAAAAAGCGGTTCAATTGATCAGCTGCTTCTATATAATCAGATCGTTTACC
AAGTGCAAGATATATTCTCATTTTCAAGCCCTCAACATTATCTGGATCTATGGAAAATAT
TCTTTCTAATGTATCGAAAACTGCTTCCCATTTCTGCATTGCAAATTCGTTTTTCATTTT
CTCGACAAGGGGTACTACTTGCCCTGAGTTGTTAATAATCAGTCTATCTAATGTTAAATT
TGATGCATCATAGTCATTTGCTAGATATTTCAATTTTGCCAACCCAAGCAGTGCTTCAAT
ACTGTTATCACTTTTTCTGATAGCTGCTTCTAAACATTCTATAGTGGATTTCGGCGATTT
TTCCTGACTCAAGCCCAGGTCATTCCATCCCTTCAGAATTATAGAATCTAAATTATTAGG
ATCTTTTCTAAATACTTTATTTAAATAGTCAGATGCTTTTTCATTCATTTCTGCTAATGA
TAAAAACAAAGCTGAATAGTAATATGAAGTTATGCTTGCATGTTTCTTTTCTTCCTTCAA
TTTTGATTCTAAATTGAACAACACCTCTTTTTCTGGTAAATTAGAAACTTTGTATGCATA
AACTAGAGCAACGATCACTGCCAATTGTATCTCACTGTCTGATTGGAGCGGAGTTAGTTC
AGAAATCCCTTTATGAACTTGCCCTTCTAATATCAATGCAATTCCAGTATAGAAAATAAA
TTCTGAGTTCCTAGGATTTTGTTGCAACGCTTCGTTTGAAATTTTCTTAACATTACCATA
GTATTTTTCCCGTAAATAATAATGAATATTACATCTATGCCAAGCCAAATCCATGGTTAA
ATTATTCTAATTCAAGTTTTACATTTAGCACCTTATATTTATTAATGTTGTCTTCGTAGA
ATTTGGCTAAAAAGTGACATTTGCAAATCACATTCAACCTGTTTTCTAAAGCATGATCAA
AGGCATACTGTGCCAATAATTTCCCAACTCCTTTTCCTTGAAAAGCCTGCGGCACATTTG
TATGGATCAAGGTTATCCCCTTGCCTTTTTTCTCATAGCTGATCACAGCATCTTCTCCTT
TTATTGACACAGCAAACTGTTGCTTAGCAACATTGTTAACAACTTTTAGAGCTTCCGTGG
AGAAAGCGCGAGCTCTTGTTAACATTCCAGACATGAGAAACTATTTTCAAACCTACAGAG
TCCGAATTTTTTACTAATAGTTCAGTTTTATGTCACAAATATGTCGCAAAAATTAAACAT
GAAATGCGCCGCATTTTCTTTAATCTACTAAATTTTGATGTAAATTGACATTGAAGAAAA
TCCGTAAAATGGAACTGTCCATTGTTGCTTTAAT
(4594 bp)

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