SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR101280_c0_g1_i1
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		PREDICTED:_protein_charlatan_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001654 P eye development
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007399 P nervous system development
GO:0007422 P peripheral nervous system development
GO:0007423 P sensory organ development
GO:0007458 P progression of morphogenetic furrow involved in compound eye morphogenesis
GO:0007526 P larval somatic muscle development
GO:0009612 P response to mechanical stimulus
GO:0042683 P negative regulation of compound eye cone cell fate specification
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
Transcript
Level		FPKM:1.31 TPM:1.74
ORF EntryO_BomoN4EE51599_complete:A_BomoN4EE_TR101280_c0_g1_i1
Sequence
(Nucleotide)
CCCGCACGGACTCCGCGCGCAGGTGAGGAGGTCTCGGATGCGTGATGGCCGTCACTAAAG
AGTCGTTATGATCGACAGTTAACAAGACAGGAAGATAGATTGGTTCGAGATGGATAGCGG
CTCGGGGGTGGGCAGCGTAGCGTCTCTGAGCATGGACTGCGAAGACATGTTTAAGGAGAT
CACCAAGAAACTGTACGGCGAGGAGGCAACAGTGGGCGTGGTGGGCGTGGAGTTTCCAGC
AGCCGAGCGCGACCTAGACGACGACCTGCGGCCTGAAGAGCACATCACCGCCTGGGGCCT
TGCCGCCCTCATGCAGAACGGCTTCCCGCCCCCGGGGATCTTGCAGGCGAACTTCAGTCC
GCGCATCGACCCTACAGCCGAGGATCGGTGGACGGCCGCGGAGGAGCCGCTGGCGTGGGC
GCACTCCCGCATCGCCGCGTACAACCCCGCGCAGAGACTGTTCAAGTGCGCGCACTGCGA
CTGTGTCGGCTTCCTCGCCAGGGTCGCGGAGCACTGGCTCGGCACACACTCGCAGGCGCG
TGCATTCCAGTGTCCGGTCTCCGGATGTGGGTTCGCGTCTAGCTGGGCGCGCAGTGTCCG
CCAGCACCTCGCGCGGGACCACCACTCCGACCCCGCCGCCGCCGACCAGCTGCTGCGGGA
CAACCCCGCCCTCGACGACCTCACGCGGTACTTGCAGAGACTGAAGAATAAGGTCGAATC
TATGCGTAACGACCGGCGCTCCAACCCCGGAGGGAGCGTGGACAGTCCGCAGAGCGACGC
GGGCGCGGGGTCCGGCGGCGGCGCGGCGCCCGGCGCGGTGCCGGACGGCGGCAAGCGGTA
CGTGTGCGGCGTCTGTCCCTACGCTACCGACCGCCGCGACCTCTTCACCAGACACGAGAA
TATACACAGAGATGAAAAGCCCTTCCACTGCTACCTCTGTCAGAAGCAGTTTAATCGCGC
CGATCACGTCAAGAAACATTTTCTGCGCATGCATCGGGATCAACCCTACGACCTGAACCG
CATTCGGCGCGCGACCAACAAGCCGCAACCACAACCGCAACCCGCACAGCAGCACCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
(1110 bp)

- SilkBase 1999-2023 -