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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR101266_c0_g2_i1
Scaffold_idBomo_Scaf116
NCBI non-redundant
(nr)		PREDICTED:_lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_homolog_[Bombyx_mori]
Ontology
GO:0001817 P regulation of cytokine production
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0007568 P aging
GO:0016020 C membrane
GO:0032496 P response to lipopolysaccharide
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 C intracellular membrane-bounded organelle
GO:0050699 F WW domain binding
GO:0071222 P cellular response to lipopolysaccharide
Transcript
Level		FPKM:10.12 TPM:13.49
ORF EntryO_BomoN4EE51575_5prime_partial:A_BomoN4EE_TR101266_c0_g2_i1
Sequence
(Nucleotide)
GGCAATCCCAAGGCCAAAGCCAAGCCGCTGCCTTTTTTACTCTCCACAAGCCTCGTTTGA
AGAAGGACATGTCCTAGCATCATTTATTAATTAATCAAAATGATATGAGACACCATTAGT
TGAGGTACCATTAGTAGTATAGCTATAGGTAGGCAGTATAACTGGCAGTAGGCCAGTAGT
AAAACAATATTCCAGTCGATGAATAATTCACCTTAATCATCTGTGACCGGGAAAGCTGTA
AAGTATTTAAAACGTCACAAATAATATATACACAATTTAAAAAAAGCGAGATTAAATCTT
TACAATTTAATTATGACCGTATAGGTCTTTTTTTATACATATTTGTGCTATAATAACTCA
TCCCAGTATTGGAAAACTTGTCGCAAAATAGTTTATTATAAATATAACAAAACATAAATA
AAATGTTCCTGACAACAATATCTAATGATTTTTTTCAAATTAGGGAAAGATATACTGTGA
CATATTTAATATAAAGTTCATAAGAGAATAAACAGTTGAAGAGAGATATATGTACGCCCA
ACTGAAATAATGTTTTTTTTTTATTTGCATTTATCACAAACTCATCAATTTGTATAGGTT
CCAATGTAGGCGTTGCAATTCGGACAGTAATGAGTAGCATTTTGACAGCTTTCCATGCAG
TAAGGGATGCAAGCACATGGCCAGCATCCTATCAAACAAAGGATTAACGCAAAAAGATGA
GTCTTGCTCGAAGCATCGTGTTGAACCCTAGTTACGATGACCGCGGTACAGGAGGGGCAG
GTTAAACTTGATGGTTCAGGGCCCATTGGTCGCGCTTGCACAACCGTCACGAATTGTTGA
GGAGCCACGACGGGGACGATAGGAACATTAGCATATGGAACTTGCTGGGGCTGATAGTTG
TAAGGAGGCGGATTTTGTGGAGGAGGCCCATAGTTCGCGCCAGACAGATTTCCTTTATGT
TCAAAGTTAGCCATTTTAGTTGTTATTTCACGACACGCAATATATAATGTCGGCACGAAC
ACAATTCCGTACGTCCGCGTCCGACGATCCCCTG
(1054 bp)

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