SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR101220_c0_g1_i5
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101744303_isoform_X2_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003682 F chromatin binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005164 F tumor necrosis factor receptor binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005777 C peroxisome
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016235 C aggresome
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0035098 C ESC/E(Z) complex
GO:0035518 P histone H2A monoubiquitination
GO:0036353 P histone H2A-K119 monoubiquitination
GO:0042803 F protein homodimerization activity
GO:0046600 P negative regulation of centriole replication
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0070842 P aggresome assembly
Transcript
Level		FPKM:0.56 TPM:0.74
ORF EntryO_BomoN4EE51466_5prime_partial:A_BomoN4EE_TR101220_c0_g1_i5
Sequence
(Nucleotide)
GCGGCGGCGGGGCGGGGTGCGCGGGGGACCACGGCTGCACGGGCGGGGTGGGGGCGCGCG
GCTCCCCCGCCCCCTCGAGCGACAGGCTGTTCAGCAACATGTCGAACAACGTGTCGTTGC
AATCCAAAATGAATTCGACCTCGTCATTGTCGCTGACGGAGGACACGGAGGGCCAGTAGT
CGTGCAGTGCCAGGTCGGGGACGGGCGACACCGCGCCGCGCTCCGGCGTGCCGGGAGGGG
TCGGCCCGTAGTTCAGGTTGGCAGGACGTCTGTGGCGCAGTTGTCCAGGGGAAAGGGGTG
TGCGCCGCGGTCGGTGCGAGGCGGGATGGTTGAGGGGGGTGGCGGGGTGCAGCGGGGTGC
CTCGCCGCGGGGGGCGGGGGGCGTGAGCGCCGCGACTGAGAATCCCCGCGGAGCTCTGAC
CGTTCCAATTGCGTTTCGGACCGTTCTTGGCGGAGGGTTTCGGCGTGAGTCCGTTGATCC
GCATGAGGTTGAGCAGCAGCATGTCGGTGTGCGCGGCCGTGGACAGCTGCGGGTCGGCGT
CGTGGTGCGCGGTGGCCGACAGCGCGGCGCGGTCCGGTCCCGCCTCCGCGCACAGCAGCC
GCGACAGGATGTCCGAGCCGTCCCGCGAGCTGTACCCGCAGGCGCCCTCTATGTCGTTCT
CGCCCGACATGGTCTCGTCGTCAACGTCATTCTCTTCGTTCGAGTTTTCGTCGACATGAA
CGGTGTGGGTCTCGTCGGCAAATACCTCTAATTCGCTGAACATCAACTCCCCGGTGTCGC
TGCTGGACTCGGAGGCGGCGTGCGCACCGCGGGCCGGGTTGCGGTTGTCGCACTCCGTTT
CGCCTTCAGTCTTGGCTCGACCGCTGTGGGAGGCACACGCGGCCTCCGCGCTGGGAGCCG
CCGCGTTCAACTCCGGCGACGACATCGAGGAGCACAGCAACACGTTCGAGGCCGATTGAC
TTATTTCCGTTGCTGGACTGCTGGCCACGGCAGTCAATGTGGAGTCCTTAGCTGGAACCT
GTTTGTCGGTGCGTGGCATTTTGTTGGGCAGCTTGTTGGGCGCGCGGCTGGGCGTGTTGG
CGGCGCTGAGCAGCGTGTGCAAGCTCACCAGCGCCATGTTGTCCGCGCCGGATACATGAA
GGGAGTTTGCTGAACGTGAGGTAGAAGGTAGATTATAAGGGGCGAGCAAAGTGTGAGGTT
GCGCCATTCGTCTCGTGTCCATAGACTGAGCGTAGTCTCCGAAGCCGAAGGCACTGGCCG
ATTGACTAGACACTTCATTATTACGGCTGTCCTCAGCAAACATGGCTGTGTTTAGGATAT
CGTTAGACATTCTCGTACTGTTGAGAGCGCCGTGCTGGCCGCATTGCTTCCACAACACTA
AGACATCATTGACAGAGTTACCGTCGACGGGGTTGTTCTGCGCGGGGTTGTCGGCCTCGT
TCGGGCCGGCGTTGGACTGCGAACTGCTCGTGCCCGTCGTGACAGCGCGAGTGGCCGCCA
GTGAGTTCCGCGACATCTCCAACGAGAGGCGCTCTTTGAGATCATTGATCTGCAGTACGT
GTTGATTCTGCATTGTAATCAGTTGGTTTATGTACCACTGCTGGTCGCGGCAACGTTGAT
AGAACGTAGGCGGACGTACTTGGAACCTCAATATTAAGGTATCGGTTTCTGGGTTCAAGT
ACCCCTCGCTGGCCAACAGATCAAGTCTGAAGAAACGATTGTAGCCCCAACATTCGCCGA
CTTCAAAGTCGGACGCGAATTCCCTTACAATGTTCTTGGAGGGGTCGCGCGACACTTGGT
GCAACATTTCCACTCGATACTCATACTTTGAAGTCTCTGGCAATCCGGCACTGAGCTCCA
AGAATACGGAGAGATAGTTCCCTCGAACTACACCATTGCCATCTGGGTACACCTTCAGCC
TCCAACATAGACCGTTGACGTGTAATGGGGCCGAGTAGACGGGCGCGGCCGCGTGTTGGA
GCTGAGTGAAGTTTGCTAGCGGGAAAGTGCTGCTGTCGTAACTCGGAACGATTTCACTGT
GAAAATCAGCCGGTACGGGGGCAGTGACAAAACTAGCCATTGGCTTCTTTCGCACTTGAT
GTATCATCTTTGATAGATCACCACTCCGTGCTATCAACTCTGATCTTGTACTAGTATGTA
GTTGATGTTCAATCTCCTGTAGCAAATGTTCAAGCTGCTCCGTCTCCTGAGTGAGGCTAT
TCTTCTGTCCCATTAAAGTAAGCAGTTTAGCCTTCAATGCAGAATCCAATCTGGAGATCA
TCAGCTCAACGGCATTGCGAATCTCACGCACTCGTTCATCTTTTGCTGCTCTCACTGATT
CTACATTGCGTTCAACATCCTGGACAAGGCTAATTAGCTCCATAAGCCTTCTCCGCAGTT
GAGTGACTTCATCACGTATCTGAGTAACATGTTGCTCATATACCTCTTCCAGCGGTTTGA
AGGTGTGCCCCGAATGGGTGCCACCCCAGAGAGCGCACTGATGACATATACAGCGACGAC
ACGTCCAGCAATAGACAGTAAGTTTTTCTTGATGATTAGGGCATCTATCACGATAATTCT
CACGGTGGCTGGCGGTGTTAGTTTGTTGCATGGTCTCTATTTGCTGAGTGACCTCTTCAA
CCCAGCGACAATTCACCAACTCATGTAGGTGTAGTGCAGCTCGACAGTGAGGACATTGGG
AGCGTTGCTCCGTCAACCAACGCCGCACACAAGCATAACAACACAACTTTGAGCAGTGTG
GACACAGATGTGCATCCACCAGCTTCTCCATACAGATGAAGCAGCGGAACACTTCAGCTA
ACGTCTCCACAATTTGCTCCTCGCCATTTCCATTCCCTTTGTCTCCCCGCGAGGCCATAT
TTGAACTACACTTCACTTGATACAATATTGGCGATTAATCTACCATAATTTAGATTGTTT
GCATTCCTAAATTAAAATGCAAGTCTCTCATATCGCAAGACAAGAGAATCAAATCGAATA
CACGCAAAACGAGACTCACTTCCGCGTTCGGAATTCAAAAGTAGGTAGAATTAAATAAAA
ATGAAATTGGTAAAGTCAAAAATAATAACAACATTAAAGCTTGCCATGTTTTGGTTCTAA
TTTCCCGTCATGATCTATGCAAGTGTAGTGTTCGCTCACGCGGCCTGCGCCAACTTAAAA
TCACTCCAAATTATTCAATCCCGTTTTTGCAGGA
(3214 bp)

- SilkBase 1999-2023 -