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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR101217_c0_g1_i1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_leucine-rich_PPR_motif-containing_protein,_mitochondrial-like_[Amyelois_transitella]
Ontology
GO:0000794 C condensed nuclear chromosome
GO:0000961 P negative regulation of mitochondrial RNA catabolic process
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005637 C nuclear inner membrane
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0016020 C membrane
GO:0030529 C ribonucleoprotein complex
GO:0031625 F ubiquitin protein ligase binding
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048487 F beta-tubulin binding
GO:0051015 F actin filament binding
GO:0051028 P mRNA transport
GO:0070129 P regulation of mitochondrial translation
Transcript
Level		FPKM:6.60 TPM:8.80
ORF EntryO_BomoN4EE51445_complete:A_BomoN4EE_TR101217_c0_g1_i1
Sequence
(Nucleotide)
TTTATTAATTAACACCTTAATACAATTTAATATCACAGACAATTAATTACGGTCCAGTAA
AATAACCAAATGAAGGATGTTTACATTTTAGCTTAAAATTGTATTAGTTTTTTCAAAATT
AAATATGACATGAACTTGACAACAAAAAACATTTATCACTGAATTTTCCCATTAATTTCT
TTCTTTCATTTACTCCAGATTTTGTATCCATATTACATTCATTAACATTTCTATGTTATT
AACTAGTTTCATAACAATAAGAATGAATTCATTCGGATATTAGGCTTAGTGGAAAACATT
CTACTAGGTCGGACGGTGGGAGCATTAAGACTAAAAAAAAACGAGGCACACATAAAAACG
GTTCGTGACGTCACTATGTAAGGTGCAGACATGCGAAATGGGGGGGAGAAAGAAAGAAAA
AAGATTTTCTTACTACGCACAGTAATTTCTTTGTATTTTTTTTAAATATATTTATAATTA
TGTATAAATAATGTGTCATTTTCGCTAAAACTATTTTAAACATTCGTATTTACAAACGAT
ATTAAGTTCTCGAAACGCTAGTTAATTTGTCCTGTTTATCTAACAGTAAACTTAATTCTG
ACGGTACGGTTCTGTTGTTCGCTTTGAGCAACGAACAAATGTTTCGAACGAATTTCTGTG
ACGGCGTCACATCCGCTTCCTGCATTTTGGTCCACAGGGACAGCGCTTCTTGACAATTGT
CGTCGCGTTGATGTACGTCCAACATTAGCTCATATATGTCGTCGACGTTAACCCTCCTGA
CGTCGCGGGCGCATTCAGCGATACATTCTAAAGCTTTCAACTTCTTCTCGTCAGCGAAAC
GTTCGCAGCGACGGTATAGCGCCTCCGGGTGAAAGTTCACTTTTGGATCGAGGAAGAGCT
TTCGAATCGTCTTCTTGTATCCCACTTCGGCTAGTGCCGCTATTAGAGTTAGTTGGACAT
CGCTGGCTCCGTGCACCTTCCTGTCGGTATTCAGTATGATTTGCGCCATTTTATTGAATC
TGCTATTACTCCTTTCGTGTATAATGAAATTGTCTTCGGATCTTCCGTCACCCATCGCTT
CCAAAATCTTACAAAGCAACTCGTGTTTCAACGGCGTCATGCTGTACTGTTTGGCGAGAC
GAACGAATTCATTCAGGGCCTCTTCTAAGTTATCATTCTTCAAGTGCACGCGCACCAACG
GACCGAGAAGCACGTTGTTGGGCTTGCAGTAACGCAGCGCTGTCAGCGTCTCCAACATCT
TCCGTACGTCTTCGGGGGAGCCATTGGCCGCGGTCGCGTCTAACAAACGCCAGCAATTCA
TTATTATACCGCGACCACCTATGATGCGTCTGGAAGTAAAGGTTATTAAACCGATTATCT
ATATATTAATACGTGAAGCAAAAGCTTTGTACCCCTTTTTACGAAAATTGCCCAGACAGA
GGAGTAT
(1447 bp)

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