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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR101189_c0_g2_i3
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_four_and_a_half_LIM_domains_protein_2-like_isoform_X3_[Amyelois_transitella]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001649 P osteoblast differentiation
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0009725 P response to hormone
GO:0015629 C actin cytoskeleton
GO:0042802 F identical protein binding
GO:0043066 P negative regulation of apoptotic process
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0055014 P atrial cardiac muscle cell development
GO:0055015 P ventricular cardiac muscle cell development
GO:0060347 P heart trabecula formation
Transcript
Level		FPKM:3.61 TPM:4.81
ORF EntryO_BomoN4EE51369_complete:A_BomoN4EE_TR101189_c0_g2_i3
Sequence
(Nucleotide)
CTAGTGTTGCTCGCCATTCGAATTCGGGTCGCGATCGCGTCCGGTGTTATCGTATCCTAG
CTTATTGAAAAAAAAAAAAACAAATCGCACCATGGCCGACGTTGACGTTCAAGTCCAGTA
CACCACCACGGAACGCAAAACTAGGAAGGTCAAGAAGACCTCCAAGCGTAGGGAGTCCAA
GGACGGCGAGGTGACCGTCACCGAAGTAGAACAGACCAACACCACCAATAACGACGATGG
CGGTGAATACACCAAGGCCATGAACAAGGACTGGCATAGCGGTCACTTCTGCTGCTGGCA
GTGCGACGAGTCGCTAACTGGCCAGCGCTATGTTCTTAGGGATGAACACCCCTACTGCAT
CAAGTGCTATGAAAGCGTCTTCGCCAATGGCTGCGAAGAGTGCAACAAGATCATCGGCAT
TGACTCTAAGGATCTGTCGTACAAGGACAAGCACTGGCACGAGGCCTGCTTCTTGTGCGC
CAAGTGCCGCGTCTCTCTGGTCGACAAGCAGTTCGGCTCCAAGCTCGACAAGATCTACTG
CGGTAACTGCTATGACGCCCAGTTCGCAAGCCGCTGCGATGGATGCGGCGAGGTGTTCCG
TGCTGGAACCAAGAAGATGGAGTACAAGACCAGGCAGTGGCACGAGAAGTGCTTCTGCTG
CGTTGTCTGCAAGAACCCGATCGGCACGAAGAGCTTCATCCCGCGCGAGCAAGAGATCTA
CTGCGCCGGCTGCTACGAGGACAAGTTCGCCACCCGCTGCGTCAAGTGTAACAAGATAAT
CACACAAGGCGGCGTGACGTACAAGAACGAGCCATGGCACCGCGAGTGCTTCACGTGCAC
GAACTGCAACACGTCGCTCGCCGGCCAGCGGTTCACTTCGCGCGACGAGAAGCCCTACTG
CGCCGAGTGCTTCGGGGAACTGTTCGCCAAGCGCTGCACTTCTTGCACCAAGCCCATCAC
AGGTATCGGCGGCACCCGCTTCATCTCGTTCGAAGACAGACACTGGCACAACGACTGCTT
CATCTGCGCGCAGTGCAAGACCTCGCTCGTCGGCAAGGGCTTCATCACCGACGGACAGGA
CATCATCTGTCCCGAGTGCGCCAAGCAGAAGCTCATGTAAATACACCTGTCTCGCTTCAA
CGCTTCCGCTCTCGCATCGCTCCATCCCTCACACGCAATACAATTTATATATGACAAATG
TTTTTGTGATGTGCAGCGAACATACCATACTACCGGTAGTCGCTAACGCCCGAGACTGGT
GCGCGTTCAGAAAGCAGGACACCTCGAGCGAAAAGATTTACGACATCACTGACAAATTTA
ACTTTCGCAAGGGCAGGGCCAACGTTAGTACGGTGCCCAAATAACGATATTTTTTTTATT
TAATAAAAGTAAAAAATACACGAAAAATCACAAAAAAATAATTAATTAAAGTGAATGCAC
AAAATTGATTTAATTTGCTTTTCTATTGAATTTATTATCTATATAATATATTTATATAGA
CTGTTATCACTCAGATATTGATACTAATAGTCGAATTTAATACGTATAATCTGTATTTAT
TTTATGTATGTATCGATGTGCTAACCGCCACGTTATTTCGCTTTGGCTGTTGTATTTAGT
CCTAGATCTATATTGCGGCGCTGGATTCACACGATGCCTTAATAACATATCTAAGTCAAT
TTTGAAATTATTATGTTTTAATATAATTCGTACCACCTTAATAAATGTGAATGTTGTGCC
TCTAAATCTTGCCTTCCTTTCTATCAATTCGAAAAACGAAGTGACAGAAAAGGACATTCG
ATTTTAACAACATTGTAATGTAAGAAGGCATCTTGGCTGGTGTTGCCAGATCTAAATTTT
ATTGTTCATCATTTATAATCGAACTTAGTAAGAAGTGCTTGTCATATTGTAACATAGTGT
GTAAGGAATATATTGACAAAGTATTAATATACTTGTTATATTTTAAGTATTTATTTATAT
ACGGGAGTACGCACTTTTTATTCGAAGAGACGCCGATGGTGTTGCTGTGTCACATGTTAT
TTAAAAAATGAGATTTTAGATGTAATGTTGCCATATACGCCATCGGAAGGTCGCCATCTA
ACACAGTAATTGTAAGTGACATTTAGTTTTACTAATAAAATTAAAAAATATAATATTTTT
GTTCTCGAATAAGTAATAAACTTGTTACGATATAATTGAATGTTATCAATATTTTTACAA
TGTTAAATAATATTTATTAGGGTGTAGAATCTTACAATAAGTGAGTAACATCTGTGTTAA
AGAATATCACTAGCTGGATTGAGTCAACAACTAAAATGTTTGGGGAACACTTTATAAAGG
TTACTTAATAAGGTTTTAAATTATTCGAAATGTTGAACTATTAATTTATAATGATAACTG
CTTACATGTGTGATCTGATCTAATTAAATACTTGTATCTACCCATAGATTGTAAACTGTG
AAACTGAAATAAATTATCAAAAATAAAACATTGTTTTTTATTTATCACCTTCATTTACAG
CAACCTCCAATTTACATTGCAATATAAGTTAATATTTAAAAAGCTATTCTTAACCAAAAA
GAATACAGTAACTATTTCATTGTATCCTTCATAAATACAAAACAGGCATTTTGTGCTTTT
GCATTGAACTTAGTATCTAGAAGATAGTTAGGAAATAGCACAGGTCTGGCTAAGACCAGA
CTCTTACTTGACCATAGAGAGAAACATACAATTATGTGCGTATTGTATTATTTTCAAAGT
TGCATAAAACATTTTTTAATACATTAATAAATAGTCACTTACTCTACAATAGGAATATGT
TTTTTTTATTATCTTTAATAGGTTAAAACTATAATATTCATTGGTATCATTTAACATTGA
ATTTTCAAGGATACATCTTACTAAGAATACGACGAATAAGACGATAATTTCGAAATTTAA
TCGCAAGCATACATTTCTCATTAAAAACACATTTTAGAACAAGTTCAGGTGCTTCTCGGC
ATTAGTATTATTTTTGGTCTGTCTAGACCTCGAATTCGTCTTCGTATCAATCAGTTCCGA
AGTACTTCTGTCCGAAATGATTTGGGGCCACAGGATGCAGCTCCGAAGTTAATATTTTCA
TTTTGGGTACGTGATCGACTACAGCTTGTACCGCTGCCGGTGTGCAGAATAAATTCGATA
AAATGATTCTTTCTTCTTTGACTCCGTGTTGCTTTAATACATTTACAGCCTGTTTAACTG
TATTTCCTGTAGACATTATTGGGTACATGAGCAACACCTGTCGTCTTGCAATGTCTTCTG
GAAACTTCGCATATACAACATGAGCTTCATGTGTGTCAGTATCACTTTCTACTAAGATTT
TACCAATCCGAATAGATCTACAACAGTCTCTAAGGCCCTGTTCCATTGCTTCTCCTGAAC
GCACAATAGACACACCACAGTTCCCAGCTCCATATTTAAGTCCTTTATATATTGCTCCAG
TAGGAGTAACAACCTCACACTCAGTATAAGGTAATTTGTTCAAACTCTCTTCTATTACCA
GACGAATGAGACGATCCGCATAGAACTTGAAATCACTACGACTTGTGTTCTTGTCCCGTA
GTATGGTTTGTAATTCTTTTATGTTATCATTAGATGGCAAAAGAGTCAGACTGTCCCCGA
ACTGTTCTTTAACATCATCTGCGTCCCACTGCCTGATGTCTTGATCAATTATTTCCATTT
TAATCCAAAACAATTTGTTGTTTTATTTTAAACCACGACTAAATCATAAAAATGAAATGT
AT
(3782 bp)

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