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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR101189_c0_g2_i2
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_four_and_a_half_LIM_domains_protein_2_isoform_X2_[Papilio_machaon]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001649 P osteoblast differentiation
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0009725 P response to hormone
GO:0015629 C actin cytoskeleton
GO:0042802 F identical protein binding
GO:0043066 P negative regulation of apoptotic process
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0055014 P atrial cardiac muscle cell development
GO:0055015 P ventricular cardiac muscle cell development
GO:0060347 P heart trabecula formation
Transcript
Level		FPKM:13.19 TPM:17.57
ORF EntryO_BomoN4EE51364_complete:A_BomoN4EE_TR101189_c0_g2_i2
Sequence
(Nucleotide)
GGCTCAGCGCGGGACATCGCCAGTCTCATTCGCATCGCAGCCCGAGACCGCCGCCTCTCC
GGCTCTCGGCCGTTTAAACTTTCCATACGATAACTTATCAGCAAATAATTGCATGAAGTC
ATCGATTAAATTAAGTGTACCGGTACGTTACGTTTCTCGTTTACAAAATACGTTCGCTGT
TTGGCCGCCGATGTTCGAGTTCGACAGTGTATTCCACAAGTGTCCGTGAAAAAGTTTTGT
GGCATCCGATTGGTCGGTCGTTTTGTTTGATTGTTGATCACGGGAGACAGGATGAATGGA
ACTCCAACCAGAAGGCCGAAAGGTGCATTTTCTGAGACGGGTGTGCGGATAAAAGAAGTA
TCAGAGGGAAGACCTTGCGACAACTGTCCAGAGCTGTGCCCCGGATTCGTCTCACACGCT
TGGAGAAAGACCTGCAAGTCATGCGGGTGTGATCGATTGAAGCATTCGGTGTACCATGAA
GAACTGGGCTCGGTTCGAGACCGACTCGGACTCCGCGACTCTAGAGTCAACCATCACTCC
TATGACAGTCCGCCCGGACTCACCGCTAAGCAGACCGAGCTGTACTGGCAGTCGCTCGCT
GAGCGTACTCCTACTAGTACAGGTGGCGCCACTGGTCAGGCGGCGTGGCGTGCTTGGCGT
ACTAGGGCCTTAGCTTCCCAATTACCAAAGCAGGATCTTACATTGGATCATTGCAAGCAC
ATCGACGAAGGCCACCGCAAGCAATATGAAGATTTCGTCGCCGCCAGGAATGAAATTGCT
CTTGATATCGGTATCGCTAGTCAACATCATGGATCTCCGCTGGAATGCATTGGCTGCAAT
AAGTCGATCAGAAGCGGCAGCATTACTATTCTTGCACCTAGAATAGGAGAAGACGCGTTT
TTCCACCCGGCGTGCTTTTCTTGCTCGGAATGCGATGAATTGCTAGTCGAACTAGCTTAT
TGCAATTTAGACGGACGATTGTACTGCGTTCGACACTACTCCGAGAAGTTGAAGCCTCGG
TGTCATGCTTGCGATGAGCTTATTTTCAGCGGTGAATACACCAAGGCCATGAACAAGGAC
TGGCATAGCGGTCACTTCTGCTGCTGGCAGTGCGACGAGTCGCTAACTGGCCAGCGCTAT
GTTCTTAGGGATGAACACCCCTACTGCATCAAGTGCTATGAAAGCGTCTTCGCCAATGGC
TGCGAAGAGTGCAACAAGATCATCGGCATTGACTCTAAGGATCTGTCGTACAAGGACAAG
CACTGGCACGAGGCCTGCTTCTTGTGCGCCAAGTGCCGCGTCTCTCTGGTCGACAAGCAG
TTCGGCTCCAAGCTCGACAAGATCTACTGCGGTAACTGCTATGACGCCCAGTTCGCAAGC
CGCTGCGATGGATGCGGCGAGGTGTTCCGTGCTGGAACCAAGAAGATGGAGTACAAGACC
AGGCAGTGGCACGAGAAGTGCTTCTGCTGCGTTGTCTGCAAGAACCCGATCGGCACGAAG
AGCTTCATCCCGCGCGAGCAAGAGATCTACTGCGCCGGCTGCTACGAGGACAAGTTCGCC
ACCCGCTGCGTCAAGTGTAACAAGATAATCACACAAGGCGGCGTGACGTACAAGAACGAG
CCATGGCACCGCGAGTGCTTCACGTGCACGAACTGCAACACGTCGCTCGCCGGCCAGCGG
TTCACTTCGCGCGACGAGAAGCCCTACTGCGCCGAGTGCTTCGGGGAACTGTTCGCCAAG
CGCTGCACTTCTTGCACCAAGCCCATCACAGGTATCGGCGGCACCCGCTTCATCTCGTTC
GAAGACAGACACTGGCACAACGACTGCTTCATCTGCGCGCAGTGCAAGACCTCGCTCGTC
GGCAAGGGCTTCATCACCGACGGACAGGACATCATCTGTCCCGAGTGCGCCAAGCAGAAG
CTCATGTAAATACACCTGTCTCGCTTCAACGCTTCCGCTCTCGCATCGCTCCATCCCTCA
CACGCAATACAATTTATATATGACAAATGTTTTTGTGATGTGCAGCGAACATACCATACT
ACCGGTAGTCGCTAACGCCCGAGACTGGTGCGCGTTCAGAAAGCAGGACACCTCGAGCGA
AAAGATTTACGACATCACTGACAAATTTAACTTTCGCAAGGGCAGGGCCAACGTTAGTAC
GGTGCCCAAATAACGATATTTTTTTTATTTAATAAAAGTAAAAAATACACGAAAAATCAC
AAAAAAATAATTAATTAAAGTGAATGCACAAAATTGATTTAATTTGCTTTTCTATTGAAT
TTATTATCTATATAATATATTTATATAGACTGTTATCACTCAGATATTGATACTAATAGT
CGAATTTAATACGTATAATCTGTATTTATTTTATGTATGTATCGATGTGCTAACCGCCAC
GTTATTTCGCTTTGGCTGTTGTATTTAGTCCTAGATCTATATTGCGGCGCTGGATTCACA
CGATGCCTTAATAACATATCTAAGTCAATTTTGAAATTATTATGTTTTAATATAATTCGT
ACCACCTTAATAAATGTGAATGTTGTGCCTCTAAATCTTGCCTTCCTTTCTATCAATTCG
AAAAACGAAGTGACAGAAAAGGACATTCGATTTTAACAACATTGTAATGTAAGAAGGCAT
CTTGGCTGGTGTTGCCAGATCTAAATTTTATTGTTCATCATTTATAATCGAACTTAGTAA
GAAGTGCTTGTCATATTGTAACATAGTGTGTAAGGAATATATTGACAAAGTATTAATATA
CTTGTTATATTTTAAGTATTTATTTATATACGGGAGTACGCACTTTTTATTCGAAGAGAC
GCCGATGGTGTTGCTGTGTCACATGTTATTTAAAAAATGAGATTTTAGATGTAATGTTGC
CATATACGCCATCGGAAGGTCGCCATCTAACACAGTAATTGTAAGTGACATTTAGTTTTA
CTAATAAAATTAAAAAATATAATATTTTTGTTCTCGAATAAGTAATAAACTTGTTACGAT
ATAATTGAATGTTATCAATATTTTTACAATGTTAAATAATATTTATTAGGGTGTAGAATC
TTACAATAAGTGAGTAACATCTGTGTTAAAGAATATCACTAGCTGGATTGAGTCAACAAC
TAAAATGTTTGGGGAACACTTTATAAAGGTTACTTAATAAGGTTTTAAATTATTCGAAAT
GTTGAACTATTAATTTATAATGATAACTGCTTACATGTGTGATCTGATCTAATTAAATAC
TTGTATCTACCCATAGATTGTAAACTGTGAAACTGAAATAAATTATCAAAAATAAAACAT
TGTTTTTTATTTATCACCTTCATTTACAGCAACCTCCAATTTACATTGCAATATAAGTTA
ATATTTAAAAAGCTATTCTTAACCAAAAAGAATACAGTAACTATTTCATTGTATCCTTCA
TAAATACAAAACAGGCATTTTGTGCTTTTGCATTGAACTTAGTATCTAGAAGATAGTTAG
GAAATAGCACAGGTCTGGCTAAGACCAGACTCTTACTTGACCATAGAGAGAAACATACAA
TTATGTGCGTATTGTATTATTTTCAAAGTTGCATAAAACATTTTTTAATACATTAATAAA
TAGTCACTTACTCTACAATAGGAATATGTTTTTTTTATTATCTTTAATAGGTTAAAACTA
TAATATTCATTGGTATCATTTAACATTGAATTTTCAAGGATACATCTTACTAAGAATACG
ACGAATAAGACGATAATTTCGAAATTTAATCGCAAGCATACATTTCTCATTAAAAACACA
TTTTAGAACAAGTTCAGGTGCTTCTCGGCATTAGTATTATTTTTGGTCTGTCTAGACCTC
GAATTCGTCTTCGTATCAATCAGTTCCGAAGTACTTCTGTCCGAAATGATTTGGGGCCAC
AGGATGCAGCTCCGAAGTTAATATTTTCATTTTGGGTACGTGATCGACTACAGCTTGTAC
CGCTGCCGGTGTGCAGAATAAATTCGATAAAATGATTCTTTCTTCTTTGACTCCGTGTTG
CTTTAATACATTTACAGCCTGTTTAACTGTATTTCCTGTAGACATTATTGGGTACATGAG
CAACACCTGTCGTCTTGCAATGTCTTCTGGAAACTTCGCATATACAACATGAGCTTCATG
TGTGTCAGTATCACTTTCTACTAAGATTTTACCAATCCGAATAGATCTACAACAGTCTCT
AAGGCCCTGTTCCATTGCTTCTCCTGAACGCACAATAGACACACCACAGTTCCCAGCTCC
ATATTTAAGTCCTTTATATATTGCTCCAGTAGGAGTAACAACCTCACACTCAGTATAAGG
TAATTTGTTCAAACTCTCTTCTATTACCAGACGAATGAGACGATCCGCATAGAACTTGAA
ATCACTACGACTTGTGTTCTTGTCCCGTAGTATGGTTTGTAATTCTTTTATGTTATCATT
AGATGGCAAAAGAGTCAGACTGTCCCCGAACTGTTCTTTAACATCATCTGCGTCCCACTG
CCTGATGTCTTGATCAATTATTTCCATTTTAATCCAAAACAATTTGTTGTTTTATTTTAA
ACCACGACTAAATCATAAAAATGAAATGTAT
(4591 bp)

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