SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR101189_c0_g2_i1
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_testin_isoform_X1_[Papilio_machaon]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001649 P osteoblast differentiation
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0009725 P response to hormone
GO:0015629 C actin cytoskeleton
GO:0042802 F identical protein binding
GO:0043066 P negative regulation of apoptotic process
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0055014 P atrial cardiac muscle cell development
GO:0055015 P ventricular cardiac muscle cell development
GO:0060347 P heart trabecula formation
Transcript
Level		FPKM:0.94 TPM:1.25
ORF EntryO_BomoN4EE51359_complete:A_BomoN4EE_TR101189_c0_g2_i1
Sequence
(Nucleotide)
ACAGATATAGGGACAGAGAAAGCGACTTTGTTTTATACTAAGTAGTGATATTCACCGCGA
ACAAATTAAATTTCCTTCAAGAACAACCTGACAAACATTAACAGCCTATAAATAGCATGA
ACATTCTTGAACGAAACAAAGTGAAGTGAAACTTAAATGCCTCCAACGGAGATATCGCAA
GACGGCATGCTGTGCCTGTCGAGACACGAGAACTGCCCCTGGGACGAAGCCCTCAAGTCA
GCCGAGGTCACATGGACCGGCCTCAAGTATACCTGCCTGAAGATATTGCATCTGTATTGC
AAAGTTTTCGATCAGGAAGATGTACTGGAAATGGTTATTAGAAAGACCTGCAAGTCATGC
GGGTGTGATCGATTGAAGCATTCGGTGTACCATGAAGAACTGGGCTCGGTTCGAGACCGA
CTCGGACTCCGCGACTCTAGAGTCAACCATCACTCCTATGACAGTCCGCCCGGACTCACC
GCTAAGCAGACCGAGCTGTACTGGCAGTCGCTCGCTGAGCGTACTCCTACTAGTACAGGT
GGCGCCACTGGTCAGGCGGCGTGGCGTGCTTGGCGTACTAGGGCCTTAGCTTCCCAATTA
CCAAAGCAGGATCTTACATTGGATCATTGCAAGCACATCGACGAAGGCCACCGCAAGCAA
TATGAAGATTTCGTCGCCGCCAGGAATGAAATTGCTCTTGATATCGGTATCGCTAGTCAA
CATCATGGATCTCCGCTGGAATGCATTGGCTGCAATAAGTCGATCAGAAGCGGCAGCATT
ACTATTCTTGCACCTAGAATAGGAGAAGACGCGTTTTTCCACCCGGCGTGCTTTTCTTGC
TCGGAATGCGATGAATTGCTAGTCGAACTAGCTTATTGCAATTTAGACGGACGATTGTAC
TGCGTTCGACACTACTCCGAGAAGTTGAAGCCTCGGTGTCATGCTTGCGATGAGCTTATT
TTCAGCGGTGAATACACCAAGGCCATGAACAAGGACTGGCATAGCGGTCACTTCTGCTGC
TGGCAGTGCGACGAGTCGCTAACTGGCCAGCGCTATGTTCTTAGGGATGAACACCCCTAC
TGCATCAAGTGCTATGAAAGCGTCTTCGCCAATGGCTGCGAAGAGTGCAACAAGATCATC
GGCATTGACTCTAAGGATCTGTCGTACAAGGACAAGCACTGGCACGAGGCCTGCTTCTTG
TGCGCCAAGTGCCGCGTCTCTCTGGTCGACAAGCAGTTCGGCTCCAAGCTCGACAAGATC
TACTGCGGTAACTGCTATGACGCCCAGTTCGCAAGCCGCTGCGATGGATGCGGCGAGGTG
TTCCGTGCTGGAACCAAGAAGATGGAGTACAAGACCAGGCAGTGGCACGAGAAGTGCTTC
TGCTGCGTTGTCTGCAAGAACCCGATCGGCACGAAGAGCTTCATCCCGCGCGAGCAAGAG
ATCTACTGCGCCGGCTGCTACGAGGACAAGTTCGCCACCCGCTGCGTCAAGTGTAACAAG
ATAATCACACAAGGCGGCGTGACGTACAAGAACGAGCCATGGCACCGCGAGTGCTTCACG
TGCACGAACTGCAACACGTCGCTCGCCGGCCAGCGGTTCACTTCGCGCGACGAGAAGCCC
TACTGCGCCGAGTGCTTCGGGGAACTGTTCGCCAAGCGCTGCACTTCTTGCACCAAGCCC
ATCACAGGTATCGGCGGCACCCGCTTCATCTCGTTCGAAGACAGACACTGGCACAACGAC
TGCTTCATCTGCGCGCAGTGCAAGACCTCGCTCGTCGGCAAGGGCTTCATCACCGACGGA
CAGGACATCATCTGTCCCGAGTGCGCCAAGCAGAAGCTCATGTAAATACACCTGTCTCGC
TTCAACGCTTCCGCTCTCGCATCGCTCCATCCCTCACACGCAATACAATTTATATATGAC
AAATGTTTTTGTGATGTGCAGCGAACATACCATACTACCGGTAGTCGCTAACGCCCGAGA
CTGGTGCGCGTTCAGAAAGCAGGACACCTCGAGCGAAAAGATTTACGACATCACTGACAA
ATTTAACTTTCGCAAGGGCAGGGCCAACGTTAGTACGGTGCCCAAATAACGATATTTTTT
TTATTTAATAAAAGTAAAAAATACACGAAAAATCACAAAAAAATAATTAATTAAAGTGAA
TGCACAAAATTGATTTAATTTGCTTTTCTATTGAATTTATTATCTATATAATATATTTAT
ATAGACTGTTATCACTCAGATATTGATACTAATAGTCGAATTTAATACGTATAATCTGTA
TTTATTTTATGTATGTATCGATGTGCTAACCGCCACGTTATTTCGCTTTGGCTGTTGTAT
TTAGTCCTAGATCTATATTGCGGCGCTGGATTCACACGATGCCTTAATAACATATCTAAG
TCAATTTTGAAATTATTATGTTTTAATATAATTCGTACCACCTTAATAAATGTGAATGTT
GTGCCTCTAAATCTTGCCTTCCTTTCTATCAATTCGAAAAACGAAGTGACAGAAAAGGAC
ATTCGATTTTAACAACATTGTAATGTAAGAAGGCATCTTGGCTGGTGTTGCCAGATCTAA
ATTTTATTGTTCATCATTTATAATCGAACTTAGTAAGAAGTGCTTGTCATATTGTAACAT
AGTGTGTAAGGAATATATTGACAAAGTATTAATATACTTGTTATATTTTAAGTATTTATT
TATATACGGGAGTACGCACTTTTTATTCGAAGAGACGCCGATGGTGTTGCTGTGTCACAT
GTTATTTAAAAAATGAGATTTTAGATGTAATGTTGCCATATACGCCATCGGAAGGTCGCC
ATCTAACACAGTAATTGTAAGTGACATTTAGTTTTACTAATAAAATTAAAAAATATAATA
TTTTTGTTCTCGAATAAGTAATAAACTTGTTACGATATAATTGAATGTTATCAATATTTT
TACAATGTTAAATAATATTTATTAGGGTGTAGAATCTTACAATAAGTGAGTAACATCTGT
GTTAAAGAATATCACTAGCTGGATTGAGTCAACAACTAAAATGTTTGGGGAACACTTTAT
AAAGGTTACTTAATAAGGTTTTAAATTATTCGAAATGTTGAACTATTAATTTATAATGAT
AACTGCTTACATGTGTGATCTGATCTAATTAAATACTTGTATCTACCCATAGATTGTAAA
CTGTGAAACTGAAATAAATTATCAAAAATAAAACATTGTTTTTTATTTATCACCTTCATT
TACAGCAACCTCCAATTTACATTGCAATATAAGTTAATATTTAAAAAGCTATTCTTAACC
AAAAAGAATACAGTAACTATTTCATTGTATCCTTCATAAATACAAAACAGGCATTTTGTG
CTTTTGCATTGAACTTAGTATCTAGAAGATAGTTAGGAAATAGCACAGGTCTGGCTAAGA
CCAGACTCTTACTTGACCATAGAGAGAAACATACAATTATGTGCGTATTGTATTATTTTC
AAAGTTGCATAAAACATTTTTTAATACATTAATAAATAGTCACTTACTCTACAATAGGAA
TATGTTTTTTTTATTATCTTTAATAGGTTAAAACTATAATATTCATTGGTATCATTTAAC
ATTGAATTTTCAAGGATACATCTTACTAAGAATACGACGAATAAGACGATAATTTCGAAA
TTTAATCGCAAGCATACATTTCTCATTAAAAACACATTTTAGAACAAGTTCAGGTGCTTC
TCGGCATTAGTATTATTTTTGGTCTGTCTAGACCTCGAATTCGTCTTCGTATCAATCAGT
TCCGAAGTACTTCTGTCCGAAATGATTTGGGGCCACAGGATGCAGCTCCGAAGTTAATAT
TTTCATTTTGGGTACGTGATCGACTACAGCTTGTACCGCTGCCGGTGTGCAGAATAAATT
CGATAAAATGATTCTTTCTTCTTTGACTCCGTGTTGCTTTAATACATTTACAGCCTGTTT
AACTGTATTTCCTGTAGACATTATTGGGTACATGAGCAACACCTGTCGTCTTGCAATGTC
TTCTGGAAACTTCGCATATACAACATGAGCTTCATGTGTGTCAGTATCACTTTCTACTAA
GATTTTACCAATCCGAATAGATCTACAACAGTCTCTAAGGCCCTGTTCCATTGCTTCTCC
TGAACGCACAATAGACACACCACAGTTCCCAGCTCCATATTTAAGTCCTTTATATATTGC
TCCAGTAGGAGTAACAACCTCACACTCAGTATAAGGTAATTTGTTCAAACTCTCTTCTAT
TACCAGACGAATGAGACGATCCGCATAGAACTTGAAATCACTACGACTTGTGTTCTTGTC
CCGTAGTATGGTTTGTAATTCTTTTATGTTATCATTAGATGGCAAAAGAGTCAGACTGTC
CCCGAACTGTTCTTTAACATCATCTGCGTCCCACTGCCTGATGTCTTGATCAATTATTTC
CATTTTAATCCAAAACAATTTGTTGTTTTATTTTAAACCACGACTAAATCATAAAAATGA
AATGTAT
(4507 bp)

- SilkBase 1999-2023 -