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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR101187_c1_g1_i1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_vacuolar_protein-sorting-associated_protein_36_[Papilio_xuthus]
Ontology
GO:0000814 C ESCRT II complex
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0006810 P transport
GO:0007224 P smoothened signaling pathway
GO:0008105 P protein localization
GO:0008283 P cell population proliferation
GO:0008593 P regulation of Notch signaling pathway
GO:0015031 P protein transport
GO:0019233 P sensory perception of pain
GO:0031902 C late endosome membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0042981 P regulation of apoptotic process
GO:0043130 F ubiquitin binding
GO:0043162 P ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0043328 P protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0045450 P bicoid mRNA localization
GO:0051028 P mRNA transport
Transcript
Level		FPKM:34.34 TPM:45.74
ORF EntryO_BomoN4EE51348_complete:A_BomoN4EE_TR101187_c1_g1_i1
Sequence
(Nucleotide)
AAAAAATTCGCACTAAGCATACTGTTTGTTTATAAATTAAAAGCCAAAAAGATGATTTCA
CCGTAGTTTAGCGCCAGCTACACGCAAACGGGGCAGGAATAGTCAAGCGCTATCTGTAAG
AAAACACTAGTAAAAAGTAATCTTTAATATACACTTACATATAACATCAGTTAACAAGAA
ATTAACATAATATTTATTAGGCCTCTAACAAAAATCTGTTGGGGTAAAAAGCCAAGCCTT
CAATTGACTCGTCACGGCACGCCAAGCCAAGTCTTTCCGTAGTAAATAGTCTCTCTCTCG
CCAACAAGACTGATACATTTGCTATTTGCGATAGCTTCTCTGGTGTGAGGTATCCATTCT
CTTGTATCATATCACTTGTAGATTTAGCAATCTCTTCATCCCTGTTGCTATTCAGCTGTA
AGACACAAGCTCCACTAGGGAATTTTCGGAGTGACATGGGAGCGTCTACAGTTCGTAGTA
ATTTGCAAGCATTCAATAAGTCTTCTGGCGATACAAGCTCTAAGCCCCTGGCTCGGTTTA
CTCTACACCATACATCAGCTAAGGACATTATTCCACCACACTCCAATAACACAGCAACCA
TCATATCTGATACTTGTTGTGCAAGACCCAAATAGTATTCAGAGTCTGATCTGAATGCAT
CCCTAGTTACTGGATCATCTATACCTAAGCTCATGAGGTAGGATTTGAATCTAACTGTAT
CATCTTCTGAAATATCACCTTGTTTTTCCCTTATTTTTGTAGAAATATTCTTTGATAAAG
ATACCATTTCTTTTGCCTTCTCCATTAACTTAGTGAGGTCTTGAAATGCCACACTTATAC
TCTGATCTGTGGCTCTATGCTGTTCTTCTATACTTCTTTCAATTCCTACAATGCCTGACC
TAATCTTAGAGTTTACAGCTGTGACTGTGGGTCTTGAGGCCGTTGTTGGGCTTGTAGCTG
TTCTCGGAGTGTCAATTGGAGTTTGTCTTTCCCAAGCTTTGGCAGCAACAGCGTCACTTA
AAGCTTTGTAAAAAGCAGTATCTACTCCATCTTTGAATGATAGTTTCACATAGTGAAATG
GGCTCACTACTGCTGGACCAGGCCTTTTCCCTGGCAGTGCAGGACCTAAATGCATTATTA
TTCTTTTTGGACCCCCAAGACCAAATACGCCACCACTTTCTTCTTCTAAACAAAACACAT
AATACAGATGGAGAGATAAACAAACTAAGCCTTTTGGTATATCTCCTGGTTTTCCCCATA
GAAGTCTATGTGTTGTTAATAGAACTTCACCATCAATGAACTGGGTCTTATCGTCACCAT
CGTAAATTTTAACATTTTTGTCTCGTTTTAAATAGTTTTCTCCATCGAATAATCTTGCCT
CGATATACTCAAATCTGTCCATTACATTAAATTATTGATTGCTAAAATTAAATTTAATAC
ACTGAAGAAATAATAAAAAAAAATTATAGACCAAGGGTTTTT
(1482 bp)

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