SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR100983_c0_g1_i1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_coiled-coil_and_C2_domain-containing_protein_1-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:0.42 TPM:0.56
ORF EntryO_BomoN4EE51316_complete:A_BomoN4EE_TR100983_c0_g1_i1
Sequence
(Nucleotide)
GAGGGGGCCGCGGGGCGGGGTGCGGGCGGGGCTGGGCGCGGTGCTTCAGCTGGATCAGCG
GGTAGGGGCGCGTACCCCGGCGGCGTGGGCAGCTCGTCCCCGGGCAGCGCCCTGCCGGCC
GCGTGCAGCCGCACCGCCTCTTGGTACTGCTTCACAATGCGCCCCATGCGACGCGCCTTC
GAGGAGTTGCCGTCTTCCTTCGCTTTTGACTCTTGTTGCTGAAAATAAGCTAGCCTCTGT
CGTAAAGCTTCTTCCACCGTCGAGGCGGTGATCAGCTCCGTGGAGGCTGGAGTCGACGCT
GGTGTTGGTTCTCCGGAATTTTGCATTTGTTCATCGGCCTTTGGGCTCTTGAGGGTCGCG
GCGACCGACTCCAAAGTAGGTAAATCGGCTAAATCGAAGTCCATCCCCTCGGTGGTCGTT
TTGAAAGCAGTCACCAGAACATCGAACTGCTTCACTGTCTTCAAAAACTCGAGTGCTAAT
GCTTTATCCCCCGATTTTTTACAGTGCAACGCCGCCGCTTTAAACTCTGCTTGACGTTTC
AATATTGCCTGCAGCTTCTGCTGTCTCTCAGGAGTGAGGGTATCGTCTGCTTGGTGTAAG
CTTTCAGCTCGCGGTGGAGGCAGTGGTGGCTCCTCTGGTTCCGGTAGACTGGGCGGTGGT
TCTTGCGGTTCTGGTAAACTGGGAGGATCCTCGTGTCCAAGATCTATCAGTAGTGGCTCT
GGGTCTGTTGGTGGTTGTACTGGACCAGAGAGTGGTGCTGATGGTGTGGAATCAGCAGGT
TTTCCAAGACTTACGGCTGGTGGAATGTCTTCTTCGCTGATGGGTTTACCAGCTTTAGCT
TGCTTTAGTAGATCATTTAGAGTCTTTATACCTCGGTTGAATCTTCTAGCCCTACTGCTT
TCACCCTTTTCCTTTGCATGTTTTTCTGCAGCCATATAATTATTAATTCTGTCCTGTAAA
ACCCCCACAATGCCAGTATCAGCTCCAGGAGGAGGAGGTGCAGGACGGGAAGAACGAGGC
GGAGGTGCTGGAGGAGCTTCATCATCGAGGCCTAAGTTTTTTAATTCATTCAATAAGTCT
GGATCATCTTCGTCGCCTTCATCAACATCCTCGTCTGAAGGTATATCCTTTAAACTTTCA
GCTATCATGGCATCGAGATTGGCTGATGGTGGAGCCTTTTTTGGTCTCTGTCTGCTTGTG
CCACCACTAATGGCAGCCAATTCTGCTTCCAAATCAATATCATCATCAGATAGATTTAGT
GGTTCATCATCTGCATCGTCCAAATCAGGAATATCTAACAGACCAAACTGCGACAGATTC
CCTTTTTTTTGCCGGTTTCTGATTTCTAAACATTTTAAATGTCACGAGAAAATGTTAAAA
TTAATGATAGAAAAGTATAATTTGAATTACTAATAATAAAATTAGGAAGAATGATCTTGA
CCAGCGTTTTTATTTTTACTGAAAGTTGTTTTCCTTTTCGTATGTTCCTCGATTTGACAT
ATTGAAATTG
(1510 bp)

- SilkBase 1999-2023 -