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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR100590_c0_g1_i1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_protein_slit_isoform_X2_[Bombyx_mori]
Ontology
GO:0001764 P neuron migration
GO:0003151 P outflow tract morphogenesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007432 P salivary gland boundary specification
GO:0007502 P digestive tract mesoderm development
GO:0007509 P mesoderm migration involved in gastrulation
GO:0008078 P mesodermal cell migration
GO:0008201 F heparin binding
GO:0008347 P glial cell migration
GO:0008406 P gonad development
GO:0010632 P regulation of epithelial cell migration
GO:0016199 P axon midline choice point recognition
GO:0022409 P positive regulation of cell-cell adhesion
GO:0030154 P cell differentiation
GO:0030182 P neuron differentiation
GO:0031012 C extracellular matrix
GO:0035050 P embryonic heart tube development
GO:0035385 P Roundabout signaling pathway
GO:0046331 P lateral inhibition
GO:0048495 F Roundabout binding
GO:0048813 P dendrite morphogenesis
GO:0048846 P axon extension involved in axon guidance
GO:0050770 P regulation of axonogenesis
GO:0050929 P induction of negative chemotaxis
GO:0071666 C Slit-Robo signaling complex
GO:2000274 P regulation of epithelial cell migration, open tracheal system
Transcript
Level		FPKM:23.15 TPM:30.84
ORF EntryO_BomoN4EE51210_complete:A_BomoN4EE_TR100590_c0_g1_i1
Sequence
(Nucleotide)
ATTCCGTCGCATTGAGAGCACGTCGTTTCGATCGCGATTGTTGATCATTAAAATTGTTCG
TACAAAACATTCGCTTCGGTCGTGTGTTATTTGTGTACTGTGCATAATAAATATTCGCTG
TGTATCATTTCAAACAGTTTATCCTGAAGCAACATGACTTAGAGCAGACACGATGAAGGT
CCTACTCCTCTTGGCTCTGAGCTGGGCGACCGCCGCGGCCACCTGCCCATGGGCTTGCTC
CTGCAGACCACCGGCGGCTGACTGCGCGCACAGAGGACTCCTGCATGTACCGAAGCGCCT
GCCTCCGGATTCGCATAGACTAGACCTTCAGGGTAACAATATCAGCATAGTCTTTCAGAG
CGACTTCCAGAACATCAAGGAGCTTAAAGTTTTACAGCTGTCGGAGAACCAGATTCACAC
GATTGAGAGAGACGCCTTCCTCGAGCTGACGTCACTTGAACGATTAGATCTGAGCCGAAA
CGAGTTGACAGCGATCAGTCGCCGCACGTTCCGAGGGTTGACCGCTCTGAAGAGTCTACA
CCTCGACGGGAACCAGCTGAAATGCATCGACGAGAAAGCTCTGGAGAATTTGAAAAGCCT
GGAAGTTCTGACTTTAAATAACAACAACCTAACGTATTTGTCGTTGGAGCCGGTCACCGT
CTCGCGACTGAGCACGCTGCGGCTGAGCGACAACCCGGTCGTCTGCGACTGTCGCGTCGC
AAGACTGTCCACAGCCGTCCGGTCTGCAGGGATCATGGGCGTCGGTGCGAGGTGTCAAGC
TCCTGCAGCTCTGCGTGGCTCGCTGCTGACAGACTTAGAGCCTCACGAACTGATCTGCAG
TGGACCTACAACAGCTTCGTCTGGGGAATGCTCGGCGGAGCCCCGCTGCCCGCCTCCCTG
TCGCTGCACTCCTGAGGGTATAGTGGACTGCAGGGAGAAGATGCTCTCAGAACTACCACC
TACTATACCTCACAGAGCTACGGAGATCCGCTTGGAACAGAACGAGATAACCGAAGTCGG
CAGCGGCGCCTTCTCATCCATAAAGAGGGTGACCAGGATCGACCTGTCCAACAACAAGAT
CGCCAAAATCTCAGCGGACACATTCCAAGGGCTCGTACATTTAACCTCACTAGTCTTGTA
CGGAAATAAAATAAAGGATTTGCCGTCGGGAGTATTCCACGGGCTGGGATCTCTCCAATT
ATTACTGCTGAACTCGAATGAGATTACGTGCGTCAAAAAGGACACGTTCCGTGATTTAGA
GAATCTAAAATTACTGTCTTTATACGACAACAATATACGATCACTGCCGAATGGTACCTT
CGATGCTTTGACGGGAATCCAGACCTTGCATTTAGGTCGGAATCCGTTCGTATGTGACTG
CTCTCTTCGCTGGCTGGCCGCCTACTTGCGCAAGAACCCCATAGAGACGTCCGGCGCCAA
GTGTGACTCTCCGAAGCGCATGAACAAAAAGCGAATCGACGCTCTCAGGGAAGAGAACTT
CAAATGCAAACCGGGTGAGGGCGCGGGGGAAGCGGCGGCGTGCGGGGGTGCGGCGTGGTG
CCCGGCAGCGTGCACTTGCGAGGCGGCGGCGCTGCGGTCGCTGTCCGTGCGTTGTGAGCG
CGCCGGCCTTCGCGACCTGCCCCGGGACCTACCCCTCAACACCAGGCTGCTAATGATGTC
GGACAATAATTTGGGACAGATAAAGTCTGACGGACTCTTCGGGAGGCTGCCGGACCTCAC
CAAACTGGACTTCAGGAACAACGGCATATCGGTCATTGAGGACAACGCGTTTGACGGCGC
CGCCAACATCCAGGAGATGCTGCTGGATGGGAATCTGCTGCAGACCGTCACCGACAAAAT
GTTCTTCGGACTCCACAGTCTTAATGTCCTATCATTAACGCATAACAAGATTAAATGCAT
CACACCGGGCGCATTTGACCATCTCACCACGCTCTCAACACTTGAGCTGTCATCGAACCC
GCTGTCGTGCACCTGTCACATGTCGTGGCTGGCACAGTGGCTGCGATCGCGGCGTTTGTC
GACGACAGCCACGTGTGGCTACCCGGCTGCGCTCAGAGACGCCAGCATCCACCACCTCGA
GCCGGCTGACTTTAAATGCACCCCCGAGGACAAAGGTTGTCTGTCGCCTGAGTATTGCCC
GGCTCAGTGCTCGTGCACCGGGACCGTGGTCCGGTGTTCCCGGGCGAAGCTCACCTCTCT
GCCAGCCAACATCCCCAAGCAAACAACCGAGCTATACCTAGAGTCGAACGAGCTTACGTC
GATCCCGCCGGATCAAATCCGCCACCTCACGCAGCTGACCCGGCTGGACCTGTCCAACAA
TAAGATCAGCGTTCTCGGCAACAACACCTTCGAGGGCCTCACCAAGCTGTCCACGCTCAT
CGTCAGCTACAACAGGCTGAGATGTGTCCAGAGGGACGCCCTGAAGGGTCTGAGTCAGCT
GCGGGTGTTGTCCCTTCACGGCAACAACATATCGCTGCTCGCGGACGGCGTCTTCAGGGA
CCTGGAGTCCATATCGCATGTAGCGCTGGGCTCCAACCCCCTGTACTGCGACTGCCACTC
CCGCTGGCTGTCAGAGTGGGTGCAGAGCGCGGGGGAGTTCGTGGAGGCCGGCATAGCGAG
GTGCGCTGAGCCTCCCGCCATGAAGGACAAACTGCTTCTAAGCACTGCCTCTTCTGCTTT
TGTATGCACAGGCAACCCGCCGGCGGAGATCATATCGAAATGCGACCGCTGCTACAGCAA
CCCCTGCCTGAACGGGGGGAAGTGCCTCCCCGGCGCCGGGGGAGGGTTCGAGTGCGTCTG
CGCCCGCGGTTACCATGGCAACGCGTGTCAATTCCAAATAGACGCCTGCTACGGGTCGCC
GTGCGCCAACGGACAATGCCAAGTCTTGGAAGAGGGCAGGTTCCACTGCTCCTGCCAGCC
GGGCTACACGGGGCTGCGGTGCGAGGTCAACGTGGACGACTGCCTTGGGAACCGGTGCCA
GAATAACGCGACCTGCGTGGACCTCCTCGAGGGGTACATCTGCAAGTGCTCTCCAGGGTT
CATGGGAGAATTCTGCGAGACGAAGATACCGTTCTGCACGGCGGAGTTCAACCCGTGCGC
CAACGGGGCCGCGTGCACCGACCACCGCAGCCACTACACCTGCAGCTGCCCCAAGGGCTA
CTCCGGACAGAACTGCACCGTCAACGCGGACGACTGCATCAACCACATGTGCCAGAACGG
CGCGACGTGCGTGGACGGGCTGGAGGAGTATCGGTGCGCATGCGCGGCGGGGTACGCCGG
GCGGTACTGCGAAGCGGCGCCCCACGCCGCGCTCGGCACCTCGCCCTGCGCCCACCACGA
CTGCCTGCATGGGGTCTGCTACCTGCCGCCACCGCGACCCTTGCAGGACGACATCATCAT
GGAGGAGCATCCGCTGATCTCGCAACCTAACGATTACCTCTGCAAGTGCGCTCCGGGATA
CTCGGGCCGGCTCTGCGAATATCTCACATCCCTGACCTTCAACCACAACGATTCCCTGGT
GGAGTTGGAGCCGTTAAGGACAATGCCGCAAGCCAACGTCACGTTGGTCTTCAGCACCAA
GCAGCATCACGGCGTGCTCATGTACTTCGGTGAGAACGAGCATCTGGCTGTGGAGTTGTT
CAATGGGAGGATCAGAGTCAGCTACGACGTCGGCAACCATCCCACCTCTACCATGTACAG
CTTTGAAATGGTGTCAGACGGAAGTTACCACAAAGCGGAGCTTTTGGCGATCAAGAAAAA
CTTTACCCTCAAAGTCGACGACGGACCCGCCAGATCCATCATCAACGAAGGCAGCAAGGA
ATTCTTGAGACTAGAGAGACCGATGTACCTCGGAGGAGTGCCGCAGGAGGTCGCCAAGGA
GGCTTTCTCGAAATGGCATCTGCGGAACATAACCAGCTTTAAAGGTTGTTTGAAAGAGGC
CTGGATCAACCACAAGCGAGTGGACTTCGTGAACGCTGTCCGGGTACAGCGCACAACCCC
GGGATGCGGAGACGACGACGCGCCAGCCCCCTCCGTCATCAGCGGCGTCCAGGACGACAC
CACCCACGAGGAGGACCCGTGCGTGCCGAACCCGTGCGCGCGGGGGGGGCGGTGCGTGCA
GCGGGCCCGCGGACACTACTCCTGCCGCTGCCCCCCGGGGACCGCCGGCCCCCAGTGCGA
GCTCCGCGCCAGCATCCGTGGCGCCCCAGTGATAACGCAAGCCAAGCTCCCCGCCAGGAG
GACCGGGTTCAGCAACGTCCAGGCTTCTCCAGCTGCACCTCCTCATAAGCAAGAGGTCCC
GGCGGAGCCCTCGGCACCGAGCGCTACCCCACCGCCGTGCAAGAAGGAGCCAACCCGGGA
GTTCGTGACGGAGGGCGCGTGTCGCAGCCGCCGCGCCGTACGGGGGGCGAGGTGTGTCGC
CAGGACGGACCGAGGGGAGAGGCCTTCGGGCGCCTGTGGTAGGGGCAGCTGCTGTGCCCC
GAGGAAAACCAAGAAAAGGAAGGTCCGTCTGGTGTGCTCCGACGGCACCAGATACACCAA
AGACATAGAGATAGTACGCAAGTGCGCGTGCGGCAAGAAATGCAACCGTAACAATCCCTT
CCAGCACTGAAGACTCTGCGATCCCATCCGCGAACCAGCCTAAGATATCTAAGGAAGGGC
ATTCACGACGCGACAAGTCACGTGACTTGTTGGACGATTTCTGCCGCGCGATAGGCATTT
CCGCTTATCGTATTTATCGATACGTGAATTTTTATGTGCAGTATTATTTTTTAGCATTCG
CTTTCGGATGTGTCGTTCAGATTTTGATATTTTTTTTGTTTAATTAATGAAGTTTCTTTT
GTCGTATTCTAGCCTGTTCGGACAAGATGGCGCCCGACCACAGAGTAAATACAAACGCAG
TGATCCTATTTGTATCAGTGTAAATGTTTTCACTCCATTCAGAGATTTCGTTACAGTGCT
TGTCAGTAATAACATTGAATACGAAACTCCAAGATTAAATTAATTGACAGACTGAGAAGC
ATAGAAACTATCTAAAGACATGGAGTTCTGAGCGCCACATCCGACGCTAATATTAATTTT
TTGCATCGAACTTAAGTTTAAAGTACAAATTAATGGATACACAATAATAAATGAGGCTAT
CAATCGTCACACCTGCAATATTGTTCTCAAATAAACCACAGACAAGAACACACACTCTCA
CCGCTAGATGGCAGTAGGTGTATTTTGAGTAGACATTAACAAAATTGTAGGTGATACCCT
ATTTACATTTATAATTCTACCAACGATAACAATTTTTGCGATTATTAGTTTAAAAAGAAT
ACTTTTAATTTCTCTTAATACAGAAGGCCTAAGTAATGGATAACAGATTAATATATGTTA
AGTTGTTTCATGATTATTAGCGTATTGAACGTGCTAGTGGCTAATACTAATTACGCAGTA
CATTTGTACATTCCATCGCTACCCATGGTCGTATATCTTTTACAGCGGATAAGTAGACAC
TTTTCATTGCCCAAAATAAAATGTCTCAAAATTGCTTAGATAAATTCGACGCCACCCATC
CACCGTAAATGTCAAATAATATCATTCAACATTGGCATTCAATTAATCAATTCTTTAAGA
ACACATTCAACATTGGCTGATTGTGGACGCTATGACCACGTCGGTTTTAGGCAACGCTTC
TGAAAACTTCGACTTGTGCTTTGCCATTGTGAAGATACCAAAATTCCTGGTCACACTATA
TCGAGCGTGAACGAAGCGCGTGTGAGGTATCTTAAAGCACAAGCTCTCTGTGAAGTACCA
CTCTGAGGAGTAACGACGTTTTAAAAGCTAATTTCGCTTGACCGTGCACCATAATGCTGA
TACCGAACTCCGCCCAAGATATCCACCATCACCACCACCACTCCGGTACTCCGACGCGAC
ATTCTTTACAGCGAGCATGGCTATACACCTGTCTCCGATGGATTGGATTGAACTAGATAC
CATTGACTATATTAGAGACATGAAATTATTTTGATGCTAATGTTAAGTGATTACCAGAGC
CTATAGCTACCCATTTTAAGATATGATTTCGGTATCAGTTTTGTAATACAACGCCTATCT
TGCCCTTCAAACTGGAACGCATTACTGCTTCACAGTAAAAATAGGCAGAGTGGTGGTACC
TGCTCTTGCGTGTTCAAAAGATTCCCATATCACTAACTTATTCCAATAAATAATTTTAGT
AATTCACACTTAGGTAGTCTGCAGTCTGTACTATAAAATAAAATACTAAAATAAAATACG
CTATTCATTACTCAAACCCTAAAATGCCACCAGAACAATTCTTGCCTTGATAAAACTATT
GAGACAAAATCAAATTATTATACTTAATTTGTTCATTTAAAATTAACTAGTTTGTAGGTA
TTTGATGATTTTCAAAATAAGATTGAGATGAATAAATAAAGAAAAAAATTTATTATTTAT
TATTATTCGTTGCTATTTCGCTTCGTGTATGTAAATTATAATAAAAAAAATTGTTTAAGA
TTTATAATAATATATTATTGTAAGTTTATAGCATTCCGTATTTATTGTTTCTACGTAAAT
TTGTAGGAGGATTTCTACTGAAACGGTAGAGTTTCGATATATTGGTAACACTAGAACAAC
GCATTTAACGACCTAAACTAACTTAACATTAGATATTTTGTAATCAGTATTAAATATATT
GTTAATCGTAGTAATATAAATACAATTTAACCCGTTAAGAGTCTGAATTTAGAGAGATAG
CTTATAGTCTTGTACTCATGAAACTAGACTTATTGCCATTGACAATGACAGTGGCGTTTG
CTTTTAGCTGTTAATTTACATATCGTTCTTTTAACTATGTATTGTTGACACCAAGAACTC
CTCCCAAGAGCTATTAATTGTTATAAAAATACATCAATATTTATCTTATCACTGTGGAAG
GTAGAATTAGAAAAGGATCTGACGAACTTCGGATAATCCCTTCATTATTTCACATGAAAG
TGGCGTTTTTGGATCAACTTTTAATTAACATCACAATCGTTTTGGCGGTAAAAATTATTA
TGCCACAGACTATATCCCTCTCAACCTGCAGTGCGTTCCGGCTCACGCATCATAAAAAAG
GTGCGCTATTTATATATATTATATATTTTATAGTTATTAAACGGCACAGATCATTAATCC
AAAGCACAACAACAACAATCTATTAATATCCAAAATGTCGCTGGTACATTATCAGGCTTG
CTATGAACTGTGCAGTTGACACAGTGAAGTGTGGCGACTAAATGTATTCTACACTGTAGC
TTAAAGTTTTATTTTAAAATCTCAAACGAAATATTATTATATATTTTAAGGCGCTTAGTT
CGAATTGACATTTAAACGATACAAAGTCGCCCTCTTACTGTATTTCCAGATTTAAACGTA
TTGACAACCGGGGTCATTGCTCCTTAATCTCCCGCCATTATTTAGATTTTAGACACAAAA
ATACTATTATCAGAAATCTCAAAACGCTTGAAGGAAGCTACACGTGATGCTAAAGCTGGC
TGGTACTTTGCACAGAGAGTGACTCTGGCTATCCTACGAGGTAACACAGCCAGTATTTTG
GAAACTGTGCCCCCCTCAAGCGTATTGGAAGATTTGTTCTACTTTATGAATTGATTTATG
TTAAATCATTATTATTAATGTAAAAAATAAAAGAATAAATACTCTATAATAACTGAATTC
TACCCCGAAGTAATTTACCAACAATTTTTGCACCGTTTCTTCTTTTGTGAACAACGAGAA
GCTATTTTTGCAGAAACTATGTTCAACGCTAAGATTCATTTGGCTCTATGGGTTTAATTG
TATATTAAAATTAATTATTTGTAAATCAATCGAATATATTATTAGCGGGAATAATCTATT
CGAAATTTGTAAAACTGCCATGCCAATATTGCCATAACCAACACGTATTGTATTTACTAT
TTATAGAAACTTTTGGTAGCTTTTTTTGTATTTTTGGTAACATCGAGCGTTAAAAGGAGT
AGCTTTTTAAGATGGTATTTCAACAACTTCACTGGGGGAGAGCATGGAGCTAATTACTAA
ATTTAACATTGTTATTATATTAATGAAATACACCTATTAGTTAAGACTCCAAGGATGCCA
TTTACTCAACGTTAATTATTAACCTAACATAGTTTGGTCGGAATCAGATGAGCGCTGCTA
TTGCATTTGTTATTGAAATAAATTATACACAAAATATACATTCCAATAAGATATTTATTT
GACCGACCGACTTAAAAAAGACAGGCAATTCACAATTCAAGTGTTCTTATTGTGTGTTAC
CTGAATTCTATGTAATTAAACCGATCTTGATTTTAATTTATTTTTTTTAAAACTGGCGCT
TCTAATGTTGCTCTAATAGTTTCTGAGTTTCAAATTTGTTGCATGTTTAATTGACTCCGA
CTACATCGATGTTGTCATTCTATTCAGCCGCCATTCGTTCGCCGCTAGGGGCGCTGTTCT
AACTCCATACAGATTTGAGTTAACTTTCATGCGATCGAGA
(8560 bp)

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