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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR100588_c1_g1_i1
Scaffold_idBomo_Chr7
NCBI non-redundant
(nr)		PREDICTED:_cyclin-H_[Amyelois_transitella]
Ontology
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005675 C transcription factor TFIIH holo complex
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006294 P nucleotide-excision repair, preincision complex assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006361 P transcription initiation from RNA polymerase I promoter
GO:0006362 P transcription elongation from RNA polymerase I promoter
GO:0006363 P termination of RNA polymerase I transcription
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016538 F cyclin-dependent protein serine/threonine kinase regulator activity
GO:0019907 C cyclin-dependent protein kinase activating kinase holoenzyme complex
GO:0045737 P positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0070985 C transcription factor TFIIK complex
GO:1901409 P positive regulation of phosphorylation of RNA polymerase II C-terminal domain
Transcript
Level		FPKM:25.54 TPM:34.02
ORF EntryO_BomoN4EE51201_complete:A_BomoN4EE_TR100588_c1_g1_i1
Sequence
(Nucleotide)
AAGCACTGCTCCTGCTAGAGCTAATGTTGGCAAATTCTCTCAGGTTGAGCTCGTGAACTC
ACCTACCGGTGCCCGCGTAGCTGAAATAACCCCATAGGCTACCAACGAATAGTTAGGGGA
AAACAAACTACCTAGTTTGTTTTCTGTCAACCAATCTTACTTTCATTTATTAGTAATACA
AAATTAATTAGTTACATACAATTAAAATTAGTTCAAATATCAGTTAGGTCAGTAAATTAT
TGTCCAATTTTGTTTACATTCTGGCCAATTACAATCTGGTGGCTGGTTAACATAATGGAT
ATTGGCTTGCCAGCGCATCAAAACGCAACTGCTGAGAGGGGATTTGATTATTGTACAAAG
TCAAGGGAGGCTCTACAGATTATAAAATAATATTGGTGATAGTCTTGAGTCCGCAGAGTA
TGTGCAACTGTGCCTATTTGCGCTGTGAAGCATTAAGGGTAGGGCATCTGTTATACTGTC
AAAACGGAGACCTTAGAGCTCTTGTCTTAAGATGGGTAGCAACATTTACATTGTAGATGT
CTATGGGCTCCAGTAACCATATAGCACCAAGTGGGCTGAAGCTTATCCACCCATCTAAGC
AATAAATATAAACTAACCACATCCATTTTCTTTAACTAAGGTCATAAGTATTTGTTTTTT
TTAGTGTGTGCAGAAAAAGCTTTTGAGACTTGCAGTTTGCAATAGATTAGAACAGATTTA
ATACAAGATAATGGTAAGTTGGAAGCATAATGTACAACCATAACTCCTAGGCTAAACTTC
AAATATACTTAAGGTGATTACATAGTATATTGCTTTCATGACACCGAACTTACAAGTTCT
ACCATAGTTCATCCCCTTCTAGCACACATTACAGAAATACAGGATTCTTTTGTTGAAAAA
ACAGCATACATAAAATATCATAAAAGGTGTACTTAGTTATTTTACATCCTACTTAAGAAT
TACTTTATTTAAATTTACAGTCAATAATCTTATCTACATTTTTATTTTAATTAATATTAG
GTCAACTTTTATTTGTTTTATTTAAGAGGCAGAAGGTGATAGAACTTGTGTAACTCCACT
TGTATCTAAAGACATTCTACTGGATCCTACATGTAAAACATCGTCTTCGTCTAGCAGCTC
TCTCATCCGACGCTTGTAAATCTCACTGTCAGGGTTATTTTCTTGGTTCCGACATTTGTC
TAATTTCTTCTCTATAAGTCGTACTCGTTCTCTAGCTGGTGCCTCTACCATTTTTACTAA
TGATCTAATCTTTCTTACAGCTTCAATAAGTATCGCCAATTTATCACGTCCCGCATCTCT
GAAGAGTATGTCTGTTACGTAGCTATCCAAGTTCTCTTGTTCCTTACTCGCCGCATGGAG
TACTGCAGCTAAAGCAATTTGTGACGGAGCATACAATAAGCACGCATCAGTTAAGAACAC
CTTTTCTAGGAACTCATCAATACCACTACGAAGACGTTCCGGATTAGCCAATGAACATCT
AGTTTTAATGTCTATTAGGAATCCTTCTACTGGTCTGAAAGGATTATGTATGGTCAAATG
GTAGTTTAATTGTTGCATTAGCAATAATTCATTGTTTAGTATTATATCTGATGCTTTTTC
TCGATCTCCTTTGATATTGGCGACGAATTGCCCGATAGAAACGTTAAATTCTTCAACTTT
ACACGCTAAATACACGCAAGTAGCTAAAATTTCTTTTGGATGATAGTCCATTGTCGAGTT
GTATAGATAAAATCGTTTGAAGTAGTGAAAAGCTGTGCCCACCACCCCTTTGGGCATTGG
AGGTGTGAATCTCTTGCAGAACTCTTTCAGATGGAGTTCGTATTGCTTTAAAAGTTGTCG
TTCTTCATCAGGAGACAGGAAATACGTGAAACGTTGTTGCTCGTCGATGTGCGAGTTCTG
TCTCGCGTAAAAAAAATAATTGTGTTTTTCACGTAAGCGTGCGAGTTCATTTTCATCACT
GAACGTCCAAAATTTTCTTTGAGAGCTGGTAGAAAACATATTTTACTTGGAAACTAAAAG
CGGATTGTAAAATCTTCAAATTCAGAAGTTTGCGACTATCGTTAAAAGTTTG
(2092 bp)

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