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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR100582_c0_g1_i2
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_FERM,_RhoGEF_and_pleckstrin_domain-containing_protein_1-like_isoform_X4_[Bombyx_mori]
Ontology
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0007416 P synapse assembly
GO:0008092 F cytoskeletal protein binding
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0030425 C dendrite
GO:0030676 F guanyl-nucleotide exchange factor activity
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043197 C dendritic spine
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0048365 F small GTPase binding
GO:0048813 P dendrite morphogenesis
Transcript
Level		FPKM:5.32 TPM:7.08
ORF EntryO_BomoN4EE51190_complete:A_BomoN4EE_TR100582_c0_g1_i2
Sequence
(Nucleotide)
GTGCAAGTTATGGCAACACAGTACAGAAAAGTAAATAAATATGGCAGCCAAGGACATGGT
GGGTGTGTAAATTTGTAAAGCAGTGCGCGAACGTATTAGGTGATAAGGTGCGCGTTTGTG
TGGTCTGCAATGAATATATAAATCCGAGTTAATAGTGAATGTATTTCAGTGATTATTATT
GGACGTATAATTAAGAATTTATTAAATCGATGACTCCGTGCAATGAACAAATTGAATTAA
ACTTATGTTGTGTTGGAAATTCTGCTGTGTAGTCATAAAGTACTGAAAAAAAAGATAAAT
GAAAAGTCCATGCAACATAATGAACTCAAATACAGATAAAGTGATATTTTATATCAAAGA
AATTCAAAAGGCATCAGTATGATGGACTCAGAACTACCACCGGGAAGCTGCAATTCCACT
GGACATCTGTCCACAATAGGATATCACACCTTGCCTGGCCGCATGCACCATTCGGCCAGT
ACACCGGCCGGTGTGGATGGCGCAGGCGGGGGCTCCAGGACGCCCCCCGCGACCCCCAAG
AAGGGCGGCAAGATGCTCGCGGTCAGAGTTCAGATGCTAGATGACACGATATCAATGTTT
CAAATACAGTCTAAAGCCCTTGGTCGCGTGCTGTTTGATCAAGTTTGCCGACAGCTACAT
CTCCTGGAAGCTGACTACTTTGGGCTCGAATATCAGGACAGCAATGGAACTAAGGTATGG
TACTGGCTGGACGTCGAGAAGCCGATGTGTCGGCAAGTCGGCCTGTCCATGCTGGAGCCC
ACGCTGCGTTTCTGCGTCAAGTTCTACACACCGGACCCGGCGAGGCTGGAGGAGGAGTTC
ACGCGGTACCTGTTCTGTTTGCAAGTGAAGCGCGATCTGGCCCAGGGCTGTATACAGTGC
AACGAGAACACGGCCGCCCTGATGGCCAGTTACATCGTTCAAGCCGAATGCGGCGACTTC
GTCCCGGAGGATTACCCGGACCACACCTACCTGAGCGGCTACAAGTTCTTCCCGAGCCAA
GACTCTGAATCAGAGCGCAGGATCATGGAAAACCACAAGAAACACATAGGTCAAAGTCCA
GCTGAAGCCGATTTAAACCTATTAGAGACGGCACGAAGATGCGAACTATACGGTATAAAG
ATTCACTCGACCAAAGATCACGAGGGCGTGCCGCTCAATCTGGCGGTTGCCCACATGGGC
ATCGTCGTGTTCCAGAACTACACGAAGATAAATACGTTCAGCTGGGCCAAGATAAGGAAG
ATATCGTTCAAGAGGAAAAAGTTCCTGATCAAACTCCATCCGGAAGGCTACGGATATTAC
CGAGACGTGGTCGAGTTCTTCTTCGAAGGTCGGAACGAATGCAAGAACTTCTGGAAGAAA
TGCGTCGAGAACCACGGCTTCTTCCGGTGCTCCAGCGTGCCGCGCCTGCCGCGACACAAG
ACCAGGGTTATCTCGCGCGGCTCCTCCTTCAGGTACAGCGGCAAAACCCAGAAACAGATA
GTCGAATTCGTCCGCGACAACTACGTGAAACGACAAACCTTCCAAAGCGATTTCCCTGGA
GTGGGACAAGCAGCCTCACTACCTGGAGGCTTCTCTGATGATGAAGGGATACTCGGCGGA
GGAGGCGCGGGCGGCGGCAGAACGGGCTCGGTGTCGGCCTCCCGCCGTTCGCCCACCGCT
ACAAGCTACCGCCTATGTCAACACGAGGGACAAGGTGGCTCCAGAATTGGTGACCCGTGC
CGAGGTCAATCATCATCCTATGGAGGATTCGCCTCTGCTTCATCGGACGACGACACCATC
GGATTCCCCGGAGAGTACCTGGAGACGGCAGAGTGTATCCCGAGCCCGGGCTGCCCCCGC
GCCGCCGCCCCGCACAGACGAATTATCACCCGAGGATGACACCACGCTCTCATCGGCGAG
TCTCTGCATGTCCCCCAGCTCGACGTGCGAGCGTGATGTTGATCCGGCGTGCGCGTCCGC
TGCGTGCGCGCTCGCCATGTCCAACGGGCACGACGCGCTCGATAGCGCGCACCCTAAGGA
CGTCGATAAAAACGCTACCAGTGACGTCATCAATGGAAATGTTAACGTAAATATAGTATC
CGAATCTACGAACAGTATGGACGTGCTAAGCGGGGGGGAAAGCGACACGGGCGACACACT
CACCAGGAAGAACAATAATAGCATATCTTCGAACATTTTGGGAACACTGAAGGAGGAGGG
CGGGCATGGCGCGGCGCGGCGACGCAGCGGTGACGTCACGTACTTCGTCGCCAAGGAGCT
GCTCATGACCGAGCGGACGTACAAGCGGGACCTGGAGTACGTCACGGTCACGTGGGGCCG
CGAGGTGTCGGCGCTGGCGGGCGCGGGCGGGGGCGGGGA
(2379 bp)

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