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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR100552_c0_g2_i2
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		PREDICTED:_NEDD8_ultimate_buster_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0034341 P response to interferon-gamma
GO:0034612 P response to tumor necrosis factor
Transcript
Level		FPKM:4.41 TPM:5.87
ORF EntryO_BomoN4EE51139_complete:A_BomoN4EE_TR100552_c0_g2_i2
Sequence
(Nucleotide)
AAAGAATATTTTAGGTACACCTTGTGTTACATTATTGGAGTTTTAGTAAGGATCCTTAAT
TTTTTTTAAAAAGGTTATAGCTTATGTCACTCTGGAATAGTGTAGCTTCCAAACCTTCGA
TCAACACTATTGTTGATCGAAGTTGCTAGCAGTCAGAATATTTTAAGAATGTTTGCTCAA
ACATGTTGATGTTTTTCAACCCTAAAAGTCAGCTGTCAACGTCATATTGACAATTGATAT
GTAAGACAAAGTGTTGATTTTTGCAATCTCATTTTTTGCATACTTATTTAAATATCAAAA
CAATGGAATTAAATCTTCAACATGAAGATTTATTGATTAAATTAAGAGCTAAGCTGAACG
AAGAAAAGATTAAATTATGGGAACCACCTTATTATCAGGCTGACAACGATCGCTCTCAAA
ATTTGCGGGATCTAGCATTAAAATACTCATCACAGCTATTACAAGACGATGAAACGGTGT
TTTCTGCATTACGTGAATTACAACTGCATTCACTTGACCGATCCAAAGCAAATGCGGAGT
ACAAGGAGACAGGACTGGCTACATTCAGGGTGAAAGCTAATGTATCAGGACAAAAACCTG
TAGTCTTAAAAATTCAAAAGAAGTTGGAAGTGCCAGGCAGTGATCTCATTGAAACAGTGG
CTAAGGAGATTAGTGTTGGAACTGACAGAATAAAATTGATATGCAATGGTAAAATTATAA
AACCGACAATGAATCTCAATGAACAGAATATAAAAAATGGAGTACAAATAATGGCACTTA
TTATGGGAGAAGCCCCAGAGAACGTTAAGAAAGAAAACGATATGTACATGGAGATGAAAT
CCACACGTGACGATGCTCTGCTGCTGACCGATTGCGCCGAAGAGTTGACTGGCGACGATG
AGTATTTAAAGCTGGAAGACCAATCAGGAAAAGCACTCCAACTACCGGCAGCCGAGCGAA
GATCCTTGACGGTTGGACTGGCACTGCACGAGCGCGGTCGGGCCGCTGTCCAGCAAAAGG
ACTACACGCTAGCGCTGGTGCTCCTGCTCGAAGCCGACAGGCAGTTCAGTGAATGCAGTT
CGAATCTCCTGAAATCAGTGGACAACATTGCCGTCCTTCAGCTGGACATATCCTGGTGCT
ACCTTCATCTCCAGAACCTCGCCTCGGCTACTGATGTAGCCTCCAGACTACAGAGGGCCG
AGGCGTCCTTCAAGGACACCTACGGCGAGAACCACGAGAGGCTCATCGCTCTGAAAGGAA
ACGCCGCAAACGAACGCGTTCTGTTCATGCGGCTGTACCTGCTGCAGGGCATCGTGGCTT
ACCACCAGAACAAGAGGGAGGAGGCGCGGCGACTCTTCGACAAAGCTGAAAATGAGATGA
ATTTTCTGAGAGTGGACGACGGCTCGGTAGCGGCGCTGATGGAGCTCGGCTGGACGCGCA
GCCAGGCCAGGACCGGCCTCCGCGCCGCCGCAGGACACGTGGACAGGGCGCACCAGCTCC
TGGAGGAGAGGAGCGAGGAGCGCGAGAGGGAGAGGGAGAGACACAGACAGGAGAGAGAGG
AGCGGGCCCTGGGTCGGTGCGCGGACGGCAGCCCGGTGAGCGCGGCGCTGCTGGCGGGGC
TGCTGGACATGGGCTGCGCGCGCCGCCTTGCCCTGCTAGCTCTCAAGAACTCCAACAACA
ACGTGGCTGAAGCCCTGTACCTCATGCAGGAGAGGAGGGAACTGCTTCAAGACAGTGACG
CGTCTTCCAGCGACCCGGAGACCCCGAGCTCCGACGACTCCACGCTGGAGCCCGACAACA
AGCTCGCGGCGGAGCTGGAGGCGATGGGCTACGATCTGGACGACGCCAGGATCGCCCTGA
AGCTGTCGCGGAACCAGCTGGGCGGGGCGCTGGACATCCTACTCGGGGGACAGCTGCGCG
ATGTCGGCGACCCGTCCACCAGCTCGGCGGCGGCCAGCAAGAAGAGACTCCGGAAACTGA
AGCGAGAGAAGAGGGAGAAGCGCCGACAAGAGCGCGACTCGGCTCTGAAGCGTCTCAAGA
CGTCGGTGAAGACGGAAGACGACGACTACCTGGACACCAGCCTGGTGGATGAAGAGGAAT
TCCTCGCTAAATACAAATCCTTGCTCTAAGCCATGAATATTGTGACGTCACGAGCGCGCG
CGGTCATTGACCCACGACGCCAGCCCCCGTCCGCGGAATAGCCCCTTAGACTACCAGTGA
ATCCTCCCCCTCGCGTCCCTTTCCTCATTACTGAGTCGTGACTCCCCCGCTTCATAATTT
ACTCACGGACGATTTTCTGCTGCTATACTTCGTGAAAGGCATCGTGGTACTTGACGGAAG
GAAGGTAGGAAAGTACACACGTAAATTTGATTCAATACTAGAACAGAGGTAGTGCCACTG
TAACCGACGACAAACACACTCGGGGCTTAACTATTACAAAAACGTTGAGTCAACGCGTTA
GGGGCCACGCCGCACTCCGCCCCCCATCCTCGTGGGGAGATCATGAAGTGTTCTGGAAAA
TCGATCGAATTTCATATCGTAGTTGGTAGAGAGACTTTTATGGTGTTATTAGTCAGTAGA
GATTTGTAGGATATGTTATTGACATAGTCAAACCCGACTGTGGGAGTATTAGCCCATAGA
TAACATTCTTAAATCAGTTATAGATAAGCAACTCAAGCACTCAAAATGTTTACGGGTGTC
GTCCACTAGATGGCTT
(2716 bp)

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