SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR100359_c0_g2_i1
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		PREDICTED:_pleiotropic_regulator_1_[Amyelois_transitella]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005662 C DNA replication factor A complex
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0031965 C nuclear membrane
GO:0034504 P protein localization to nucleus
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
Transcript
Level		FPKM:41.74 TPM:55.60
ORF EntryO_BomoN4EE50933_complete:A_BomoN4EE_TR100359_c0_g2_i1
Sequence
(Nucleotide)
GATTTATTTTGTAAGAAAGTTGTTGCTGTTTGTTGTCGGGTATTTCTTGGTCTCGACACC
GTTAAAATCAAAAAGCTTTTTCTAAGAACCTTAAGGGATATGCATTGATTAAAAATAAAA
TTGAATTTATATACTAATTTAACATTACAAGTTAATAGTATTTGGTTTTCTTTAACTAGT
TTTAGACAATAATTAATTGCCAAAACTTCATAATGTCTGAGGACGTGATTAAACATTCTG
TACACACTTTAGTGTTTCGATCGTTGAAAAGATCGCACGATATGTTCCTAGCTAACCAAG
GGATGTTACCGCCAATCGACGATAAAGCAGAGAAAGTACTGAAATTGGTTAAAGCAAGAG
ATAGTTACGGACAAGTGATGGGTGCAGTGCGGAAGGCTCAGGCCCTGAAACAACAAGAGT
CTGTCACCTGTAGACCTGAAACTCCACTGACCACAGAAACAGTGGAAACTGCAAGTTTGC
CGTCGGAAGGGGCTGTTGTCCCATACTCTGGACCAACACCTTCACCGTCACCAGCTCCCC
CCTCGGGGGCTTTAACTGTACCGCGGAAACCCCCATCTATGCCCAAACCAAAATGGCACC
CACCCTGGAAATTAATGCGTGTTATATCAGGTCATCTGGGTTGGGTTCGATGTGTTGCTG
TAGAACCTGGAAATGAGTGGTTTGCTACTGGTGCCGCTGACAGAGTGATAAAAGTATGGG
ATTTAGCAAGTGGGAAACTAAAAGTATCTCTCACTGGACATGTGAGTACAGTAAGAGGAG
TGGTAGTGTCACCAAGACATCCATATTTGTTCAGCTGTGGGGAGGACAGACAGGTGAAGT
GCTGGGACTTAGAATATAACAAAGTGATCCGGCAGTACCACGGTCACCTGTCGGCCGTGG
TGTGTCTGGCGCTGCACCCGCGCCTCGACGTGCTGGTGTCGGCCGGCCGCGACGGCACCG
CGCGCGTGTGGGACGTGCGCAGCAAGGCCAACGTGCACACGCTCGCCGCGCACACCGACA
CCGTCGCCTCGCTCGCCTGCCAGGCCGCCGAGCCGCAGATAATAACCGGCTCGCACGACT
CGACCATCCGTCTGTGGGACCTGGCGGCCGGCAAGTCCGTGTGCACGCTGACCAACCACA
AGAAGTCCGTTCGCGCGATCGTGATACACCCGACAATGTACACGTTCGCGTCGGCCTCGC
CCGATAACATTAAGCAGTGGAAATGTCCCGAAGGAAAATTTATACAAAACCTATCTGGTC
ACAACGCAATAGTGAACTGTCTGGCCGTGAACCCCGAGGGCGTGCTGGTGAGCGGCGGCG
ACAACGGCACCATGTACTGCTGGGACTGGAGGACCGGCTATAACTTCCAGAGGTTGCAGA
CGGCGGTGCAGCCCGGCTCCATGGACTCGGAGGCCGGCATCTTCGCCATGAGCTTCGACC
AGTCCGGCTCCCGCCTCATCACCGCCGAGGCTGACAAGACCATCAAGATCTACAAGGAGG
ACGAGGCGGCCTCGGAGGAGACTCACCCGGTCAACTGGCGACCGGAAATATTGAAGAGAC
GAAAGTTTTAGGAACAATAAAATATTTTTATACGCAATCGTTATTTGGACTACAACCAAA
CTTTTTACATATTTCTTTTTTTTTATTGGGTTCAAAGTGGACGAGCTCAGCGCATTTGGT
TTGGGTGTTCACTTCTCGTGTGCGCGTTTCGATACATCTTTCATGTTTTGATCTGTACGG
GTTTCGTTGGTCACATTTTTATTGTGCGAGAAAAATAGACGAACATCCGACTCATTTGAT
GAGTGGTCATAGAAGTTTACGGACACTACCTATCATTAAAAGACATGTCATAGCTGACCA
CCAAATGAAGATGGGCACTTGAAGAACTGAAAAATTCCACATCATGCTGTCTCGATGGGT
CATACAGTGCAAGTTTATTTTCTATAGGTTTACCTTCAAAATCCATACAAAAAAAAACAA
ATATTTATTGTAAAACTTTATTAGTGAAAAAACATTACAATTTTAACTCTCGTAAACTAA
AACAAGCAGTAGATAGATCTGTAGCTCTCTGCCTGAGATGAGTATCAAAAATTTTAGACT
GATGGAATGTTAAAATACAGTCGTGATTCTTATTCATAATATATGTTAGGCCAAATTCAA
GATTAAACCAATAAATAGATAATGATTGACACTATTTTATGATTTTCAAATCATTCAAAT
GTTAACATTTTAATATTTTTAAACACATTTCAAATTTCAAAGCAGAATTAAAGAATATAT
TTTTTACAACTCAACACTTGCAAGATATAATGTCCTTTAATTCACCAAGTAATTTTATTA
TATAACATGCCTTCTGTTCCTTGATAGATATAATCTCGGTTAATAAGGCTTTAACATGAT
AGTGCCTGCCAGCAAGCTTTGATTGCAAAAAAATAATTACAAAAAAATTAAATTAAAGAT
TACATAGACTTTATACTTTTCTAATTACATGTTTTTATTCTTCAAAAGCCTTAATCAAAT
TGTTGGATGATATTTTATTTACTCCCAATCGTGTAGAAAAATATGTATAGGTATATTGGA
GATTTATAGAAATTTTAAAGAAGTTCTCTTAAATAATTGAGATGCTTACTAAATAGAAAA
TTGTGATACTAGCTAAGAAAGGGTAATCACCTATCGTGTTTCTAAAATAAGATATTAATT
CAGTCAAAAACAATTATGGTTGTTACAAAAAAAAATTGCAACATAACACAAAATTATTTG
AATAAAATTTTAAACGCCTTAATTAACACAATATTGGAGCACATCAAAATGGTTCACAAA
AATAGAAATCTAATACTAAAAAATAATATTCAAAAGGCAGTACCCTAAATTAGTATTGCG
TGCATGTTCGAGAGGGTTATCAGCATGATCATATCTCGTCGTCGAGATCCAAGCTTTCTT
CGGGGAAGTCGCCGACGATGACATGAGCTGGACGAACAAATCCTCCATATTTAGGAGGGC
ATGTGAAGTAACGCTTGCCATTCACTGATCCATCGTTCTTGCCGAGCGGCTCGTCGTACT
GCACCCCGATCCAAAGTCCCTTGGCGCCGGCGAGCGTGCCGTTGTACCGGACCACACCTC
GCCGCGCCCCCTGCTGCGGCACGCGGACCTCGCAGCGGGCCCCCACCAACACTGCTTCCG
CTAACTTTGCCTCTTCCTCCAACTCTTTTTCCTGTTGTTCCTTCATTTTCTTCATCTCTT
CCTCATTATATTTACCAAGCCTGTTGCGTTGTAGGAAAGATCTGAGAGTATCACCCTTTT
TCTCATAGTCCTCTTCTGATAACCGGAATCTCTCAGCGCTGTCAGAAGTAGCAAAATCAT
TGACAAGAGAAAACTTATCAATGACATGTATCCTCATTCCATCATCTATCGGGTATGAGC
CAAGAAGTTTTTCATCATCTTCTATATCACATACAAAGTTGTTTTTCTTGTCATATAATT
TTAATTTCATTGTGGTTGGGGACCCGCCGGTGAGTAGCTCTAATTTTGTCTTAAATTCAA
GAATATTGATTCCCTTTTTAAATCTACGTTCGATCGGCGCCGCATCTTCGTTGTCCGATT
TTGTAATGTGTACATTAACATAGTCTTGAGTTATAACTAGTACGTCAGCCATTTTTATTT
ATAATTTAAGCGCTCTTAGCAAGAAATATAATGAAAATCTTTATTTCGGCAGAATATTAA
TATAATGAATAGTATTTCTCTGACTCATTTACAAAACAATTGGAAAAATAATGAAATCTG
AGTGACAACAGCTGACTGCAATGACTTAACGTCCAATGTCATCCGTCAGAAAGCACCAAT
TTTTT
(3845 bp)

- SilkBase 1999-2023 -