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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR100110_c0_g1_i1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		p53_[Bombyx_mori]
Ontology
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001046 F core promoter sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005783 C endoplasmic reticulum
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0012501 P programmed cell death
GO:0043153 P entrainment of circadian clock by photoperiod
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0048512 P circadian behavior
GO:0051262 P protein tetramerization
Transcript
Level		FPKM:10.31 TPM:13.73
ORF EntryO_BomoN4EE50760_complete:A_BomoN4EE_TR100110_c0_g1_i1
Sequence
(Nucleotide)
ATTATACACAAATCACAATGTATTAATTGAGTGTATGAACGACCTGTATTAATAACTTTT
AGTTTAAGTTACGGTATCCTTGCTGAATTGGAGATAGTGAACTTTATGTTTGTCCTAACC
CTGTCTAGTCTGGTTCTTCATAGAGATCTGTACTGCAGCAGTGTGTTGTGGTGTCGATGG
AATCTGTACCCACTTCACACTAGTTCTCTCTAATTATTTAAATGAAACACGAAATCATGA
CATCTCTTGAGGTTGCCACATGCGAAGATGACATAGTGAACATTGATTTGAACACTATAC
CGGATGAAGCATTGTTTCAAGGGGGGATACACGATCAAGTTGACATTGGAGTGCTAGATG
ACATTCCGTACATAATCAGTGATGTGTCTAACAATTCAAACAATTCCTTTCCTCTTGGAC
CCCGAGGACCGCCGCCTCGCAAAGACGATCCCGGGCAATACAACTTCAGCGTCGAAATCC
ACAGCAAGGATACACACAAGAAGAAGTTCTTGTTCTCGCACAAGCTGAACCGGATCTACG
TGAACATGGAGACCGACTTCGCTGTCCAGTTCAACTGGGAGCTGGTGGACCTCGCCGTGA
CGCAGATGTACGTGCGCGCCACCGTCGTCTTCGAGGACGAGTCCCAGGCCGAGAAGAGAG
TCGAGAGATGCATCCAGCACAAACTCTGCAGTTCCGATAAAGGCCAGGACCGCGTCGTGT
CGGAGAACGTGCTGCGCTCGTCGCGGCCCCTGGGCACCAACGACGTGCAGTACTGCGGCC
ACCCGGACGACCCCGACTACTGGTACTCCGTGCTGGTGCAGCTGCCCAAGCCGGGCCGGG
AGCCTTGCACGCACGCCTTCAAGTTCGTCTGCAAGAACTCCTGCAGCACCGGCATCAACC
GCCGCTCCATAGCCGTCATCTTCACCCTGGAGAGCGCCTCCGGCTCGGTGCTGGGGCGGC
AGACGGTGGGCGCGCGGGTGTGCTCGTGCACGGCGCGCGACATGTGCAAGGACGAGGAGG
CGGAGGGCGCGCGCGCGGCCAGGAAGCGGCCCCGGCCCGCGCAGTCGCGCCTCCTCAAGA
AGATCAAGCTGGAGACCGTCGGCGACCTGCCCGTCGACGCCGAGACCCTCACCCTGCCGC
CGCTGGAAATTATCGGAGCCAAAACGGTGAAGACCGGCCTGGAAGTGATGCTGCGCATGA
TGGAGCAGGCGGCCCACTTCCACAAGCACGACCAGCTCGCCGCCGACGGCTACCAGCGCC
GCGTCGCCAGCCTCCGACAGTACATCGACACGCTCGACGCCAAACCGACGAAACATGCCA
GCGAATAGAGACGGCAAAGGGAGCTGGGACTATGAAGCCACTCGATGGACCCCTTGAGAA
TCACCAGTGTCCTGACCCATCATCCTCATCATCAACAGCCCACAGTCGTCCACTGCTGCA
TATAGGCCTCTCCCAATCCACACCACTGAGCACGGACTACGGCTCATACACTTCTTGCTG
GCTACCGTTCGCACCACCATCGCACCACCTAGCCAGGAGGCGTCCCACGTTACGTCTTTA
GCTGTGCGATCTCCACTCGAGAATCCTGGTCCTGGTTCCAGGCCCAGCTCGGTATAAATT
AGACTATTCTCTTCGGATATATTCACTTCACTCGCTCAGAGGAAATAATTTACTCTCCGA
GAACTGTGCCTCTGCTGGCCGGCCATTATTGTCTATTTAAATGTAAACATTGAAACAATA
TTAATCGAATTTTTCACTATACGTGATGTCTATGATCGATTGCCATAAAAAGATTTTAAT
AGTGACAATTTATTGATCACGCTATTATGTAGTAACTAATTTTAGATCGATTATGTTTTT
GTTGTTTTTAATTTTGTTAATTAAGTTACATTATATAAGTACATTATTTTTTATCTAAAA
ATTTTAGATTAAAATTGTGATGTTAAACTTGGAAGGTAAAGAAAGCTCAGCAGCGTAAAT
TAATGTAAAAAAAAGGAAACAGTTAACACAGATAATGATAAATATATTTAGTTGAAAAAT
AAATACAGATTATAAATATATTTAGTAAAATAATTAACACTGATAATAAATATATTCACT
CGAATAATTACGAATTTGCCGTGGTTGCGGGAATCACAACATAAACAAAATTTATTATAA
ACAATTGAATTATGGTTAAATATAAAAGTAATTAATAAGTAAGTAAAGTAAGTAATAATA
CAATTTTGAAGATACCGTTTTTATATATTTTAGATTTTAAGTATTTAGATTTAGTTTTTG
GTGTTAATTTTTACTAAGTACAGTTTTTACTTTATAAAATTATTTCAATTTAATTTTTAT
ATACTTAAATGAAAGACGTAGTTTTTACTGCTAAAATGTATGGTAACATACAAAATATGT
AAAGAACTGTTAAGAGTTAATTTACTTTACATTAGTTTTAAGTTTATGCTACGTTCAATA
TGATTGAAATAGGATTGAATAGGATTTGAAACCAGTTTTTTTTTTTTTAAATAGGATTTT
TTCTCAAATTAACCTGCAGTTACTTAATTTTGTAGTACTAGGTCATTGAAAAAGCTAGGA
AGGGATTTGTTTTGATTAAAAAATAATGTAGAATGTCTAAAATAACAATTTTGTCATATA
TAGATAATACATTGATTTTATAAGGCTTTTATCTAAAGTATAAAAATGAATGATAGTTTA
GCCAACAGCTTTTTTTTTTTTTTTTTTTCGGGCCGGGGGCCGAACCTCCTACGAGGTCCC
CGCGCCTAGGGGGCGCGCGGG
(2781 bp)

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