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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR100109_c0_g1_i1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106129437_[Amyelois_transitella]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000775 C chromosome, centromeric region
GO:0001741 C XY body
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005874 C microtubule
GO:0005938 C cell cortex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0008134 F transcription factor binding
GO:0008432 F JUN kinase binding
GO:0010038 P response to metal ion
GO:0010832 P negative regulation of myotube differentiation
GO:0016568 P chromatin organization
GO:0016605 C PML body
GO:0019894 F kinesin binding
GO:0019901 F protein kinase binding
GO:0030578 P PML body organization
GO:0031396 P regulation of protein ubiquitination
GO:0033129 P positive regulation of histone phosphorylation
GO:0042803 F protein homodimerization activity
GO:0043005 C neuron projection
GO:0043065 P positive regulation of apoptotic process
GO:0044297 C cell body
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0050681 F androgen receptor binding
GO:0071356 P cellular response to tumor necrosis factor
GO:0071454 P cellular response to anoxia
Transcript
Level		FPKM:22.95 TPM:30.57
ORF EntryO_BomoN4EE50757_complete:A_BomoN4EE_TR100109_c0_g1_i1
Sequence
(Nucleotide)
CGCGATCATAGATTATACACTTTACGCGATTGTAGGCTTTCGTTGATGCACCTATTTATT
TGTTGATATAACTTTTCTTCCTGTTTTATGAAAAAATGAACGTATTTCGCTAGAGTAATG
AAGCAAAATATTCCAAGTTTGTAACCTACAAGGTTTATAATCGATTACAAAAATATTAAC
ATTCCCGATTAACATTGATGCAACATGGCAAGCGAAGATGTGATAGAATTAGGTTCTTCA
GATGATGATACTGAACCAGCGCCAAAGAAAGCAAAAACTCGACCGAATGCCATGGTTCAC
ATACCAAATAATCTTTGTGGAATAACTATAAAACCCGCAAAGCCGTCTAATAGTGCTCTC
CCACTGTCGTTAGTGGGTAGGTCAATTACAGTTACTAAAATCCCTAAAGATGTTAATCCA
GTTTCAATGAAATTAAAGAATAATGGGTGTGCTATTCAGAAGAATAATTCAGTTTCACCA
AGACCAGTTGTTAGACAGTATATCAGACAATCACCAAAAAGTAAGATGACAGGGTGCCGA
ATTCCAGTCAATTTGGTCAACATTAATAATACAAGAATAGGGAATGTTCCACAGCAGTAT
AATAAAAATCTTGTACCAAATCCAATTATGATACAGAATGCGAAACCAAAGGGATTGTTA
CCAGCTTCCATAACTGTTAAAAAAATGAATACCATGAAACTAGCCACCCCACATGTAACT
AACCCAAATATGAAGAAGAAATTAATAAAAATATCACCAAAAATACCAATAGCTAATACA
ACAGTGGAACTTGATGATGATGATGGTGCTTCTCCAGGCCCTGGACCTGCTCGTCAGTGG
TACCTGAGACCCGAAGAGCCGACTCAATTTGAAAATGATATAGGGAATGATGCCTCGGAA
ATTGAGAAACAAAATAATGCAGAGCCTACTCCATCTGATATGGTCGAGATAACTATACAA
GACAGTCCTGTTCAGTCTGCAAGAAAGAGGGCATTTGAAGTTGGAGCTGAGTTTGCTATA
ACTATTGATGATAGTCCTAGTAAACCACCAGCAGATAGCAAAACACAAGATAATGGTAGT
GATATTGAAGATAATGTACAAAAAAAGGAATCAAGTAGAAAAAAAAAATTAGAGTATCCT
TTGGAAGTGAGCAAAAGGCAGTCAATAGAAATTGAAATATTACCATTTGAAAGTGTACCA
GGAAATAAAAGTAATGATGAAGATACAGGAAACAAACACAATACTGGTACTCAACACAAT
GAGGTTATTGAAATAGAAGAGTCTCCAGCAAAGTCTCATGACCTGCAAGCAAGCACACCA
AAGAAAAAGATTCCATTGGTAGTAGCACTTAAAAATAAAACATTTGATGATCAAGAGAAT
GAAGTAAAAGAAAATAATGAATTTCATCCAGTATATCAGGAGTTTATAGCATTATGTTTC
AAATTGGAACATTCTGATGATATGGAGAAAATAGTTGAAAAAAAGATTAAAGCCTATTAC
AGACAAGTAGACAAAACTTATACTGAATCAGAAGATTTCATAGAAATGGTAGCAAGTAAA
ATTATTTCAATGAAGGCAAGCCCTGAGAAAATGTATTTGTACATAAAAGATATTGTTGAT
GAACTAAATTATAAAAGAAAAATGACAAAATCAGTTATTGTCACAGAAGATTCAACTAAA
AGTAGAGATGAAGAAAACTTTTTATATGGTGAAAATAGTGAATTTGATTCAAAACGGCAG
AGACAGATACGTAAACTTGAAAAAACACTCAAGAAGTTGCACCGAGCCATACAAAAACTT
GAGGAACAGGAGGTTGATTTTGATGATGATGAAGATTCTGTTTATTTGTTAACTGAAAGG
TACAAGGAAAGAATGGTTCGAGTTCATGCAAAGTTTTGTCAGCTGACCAACACAAAGATG
CCTTCAGAGCCTCGCTTACAGATCGAACCTCGACCTGGTCATCCTAAAGGACCAGCCAAA
AAATTAGAGAAATGGATTAACAAAAAAATTCCAATAGGCACACCATTACCTTTCCCAGAC
TTCCACGATGTACTGAGGTGTGTGAGAGAAGCTAACGAAGAAGATGATCTCAGGTGGAAT
GAGGTTGATATCATGGAAGAAGCTCGAGATCTATTCACAAGATGTGGCAAAAAAATTACA
GAGACGTAGACAAGAAAATGAATGGAGGTTAGCAGCATCAAGACTAGCTGTGGATCTCGA
CCCTGCCGAAAATAGCACTGACCTTAAAACTAAGTTAGAACATAATAAAGTATTAGCGAG
CAAGAAAGAGACAGATGTTTTTAACAAGTATGCCGATAAACAAAATCAACTTAAGCTAGA
AGCAGAAGAGATAGGTGACAAGGAAGCTGAAGAGTCACCGGACGAGAGTGACGACGAGGA
CACTGTTAATTTGGAGATGTCTTTGAAAACCAAAGAAAAGAGAAAAGAAAGATTAAAGAG
ATTACTTCAGGGTAAATCTAAAAAGGCGAATACAACGAATGACACACTCAGTAAACCTGA
TGACACAGTGCAACTTATTGAAAATAGTGAAAATCCTGTCACAAAACCCACTGACGAAAA
TGCGTCTGAAGAGGTACAGGAAACTGAAACAGTTGAAAGTGTAGATAAGGCCCAGGCTAC
GAAAGATCGTGACAATAATTCAGACTTCGGCACTTCACTAAATGATAGCAAAGAAATGGA
ATCGGACATAGACGAACTTCATCTTCTTGAAAAATTGCACTCGGATCAGTTCAATTCGTC
AACGTCAAATTCTTCAGATTCAGGGAGTGCCATACAATTGTCAGATACACTCGACTCGAG
CAATGACGACAATCCTGACCGAGATGTCATTAGTATTGAAGACTCTAGTTACTCAGAATC
AGAAACCCAAAAGCAACCAAACAGCTTATTTCAAATAGATGAAGTTATGAAGAATGAAAC
GGAAGAATCTAAGCCTGATAATAAACTAGATGACGAAATGAAAGGCACTGTTGAAAACGA
ATTATCTTTTGCTGGAGTCGGGTCGCGTTACAAGACAAATTATACAAACAATGAACCAGT
AGACGTTGTTCTTGCTTCCTCCTCCGATGACGAACATATAATGAACAGCAAAGAGAGACC
TGAGAATTGTGTAAATTTAAGTGATGATTCTATTTCTAATACTGGCTCCGTTAGTGCTGG
CGTTATTGAAAACAAAGTAGAACATGACGATATTAACGAAGCTGATAATAGTGCAGTGAG
TAGTTTTAATATTCCGTGCTCTGTTAGCAATTGTGTAGAAACGGAAAACATTGATATTTC
GGAGAAAATTTGCGACCCAACCCAAGACGACAACCCAATGAATTGCGAAACGGATTTATC
ACCTACAATCGAAAATGAAAATAATCTGACAAGTATTAATGCAACTGTCCAAGTTATTGA
GAACAAAGAGAAAGGAAAGGAAGAAAACAAATTAAGTGAACATTTATCTTGTGAACTCGA
GCATCCCATTGGGTCCAGTACCAATGAAAATGAAGTTGTCACAACCTCACATCACGATCC
AATCGACTGAGTAGTGATAAAATAAATAGGAATAGCTTAGTCAGAGAAGTTTAGTTTTCT
GGATGGAACAAAAACCAGAGTATAGCGGGCTAACAGTTATTATGTTAATCTCATTATTGT
GTGTAAAAGGGTATTTTACTGGGGTCGTTTTTCTAAGCCCCGTGTATTGTATATTGATCA
AACAATATAAGTGCTAATAAAGTATTTAAAAAAAAGTGTTTAAAGTTTTTGTGGCCGATG
AGAGATAATATTATTTTCTTTCCCTGCTAAGCAGGCAGCACTGTGCCATATAATAATGAA
TGGCGCTCGTAAAAGTTGTCGTCACATATTATTTTATATTAAAATTATATTTCTTATTCC
TAAGCATATTTTTGTATTTCTTTATTTGATCAGAGAATATAAATATTCTGTTAACTTTCC
TTTTCATTGCAAAAGTAATGAAAGATAAATCAGTAACATTGTAATATGTAATATGTGACC
TGCCTGCTTAGGGGCAAATAATACTGTTGAGCTTTACTTCATTTTAATACTCTTTAATTT
GCTATTAGCTATGTGATGGAATCTTTCAACTTCAGATTTCCGATTAGTTTGAAAATCTCC
ACACGTATCTAGGACCGATGTCAATTCACTTATTTAATATTACTTTGTCCAAATGTGTTG
ACCACCATTCTCCAGAATACTTTTATTTACTTTGGCTCGCTCGATCTAAGCGTGTTTTTT
TTAAATAATTTATTTATTGTTCATTTACATTTAAATTTATAAAGGGTATTTAAAATTGAA
AATAATGATAACGAATTATTTCAGTTTCATTAATACGTATAATATGTTATTTGAAATGTT
ATTACGCTCAAAATTGAGAAACAATTATTTATTTTGTTTATTTATGTTTTAATTCACACA
TGATATCGAAAATATATAGATAATTACCAACGTG
(4474 bp)

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