SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR100102_c0_g1_i2
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		ecdysone_receptor_isoform_B1_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0004884 F nuclear receptor activity
GO:0005496 F steroid binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0035076 P ecdysone receptor-mediated signaling pathway
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.53 TPM:2.04
ORF EntryO_BomoN4EE50742_complete:A_BomoN4EE_TR100102_c0_g1_i2
Sequence
(Nucleotide)
GGCGGCGGCAACTCACGCGCGTTGTTTCGTATCCGAAATCTCTCTCGGCTCTCTGTTACG
CTTCTCGCAGTACACCTGCTAGCATTCAGGCTTCGGCGGCTCTCACGCTCGAGAGCTCGG
AGGTCATTACGTCCTCGCTCGGTTTCGGCCCTCAGCGGTTTCACCTCGCGCCGCGTTGAC
AGCGGACGTCGACGAACTCGCTGCAGCGGTGGCCACTGACTTTTCGAAACTGTGCTGGTG
CGCGCCGTAACTCTGGCGGGCCGTCCGCCTGTGGTGTGACAGTGAAAACGTGAATATTGC
TAACCTATGCGGATGTGCAGTGACGGATGAGTAGACTGAAGAATCCAACGTCAACAAAGT
TTTGAGCAGCGAGCGAGAGCGGGTCGTCAAAATTGAGTCCAAACTGTATTTAGATTACAA
CGCTGCCCCGCTGTTCGCCTCTGAAAACGCCTCCAGTGAAGTGTGGAGTGCGGGCGGCGG
GGCCGGCGGTGGGACAGCATGCGGTAGCACCGGCATGGAGCTGAAACACGAGGTGGCGTA
CCGCGGCGTGCTGCCCGGCCAGGTGAAGGCCGAGCCTGGCGTCAGTCACAACGGCCATCC
GGTCAACGGACACGTCCGGGACTGGATGGCGGGGGGAGCTGCGGGCGGGGGTTCGCCCTC
CCCAGGCGCGCCGGGACAACCGCAGCCCAGCAACGGATACTCGTCGCCACTATCCTCAGG
CAGCTACGGTCCGTACAGCCCTAATGGAAAAATAGGTCGAGAGGAACTTTCGCCGGCTTC
AAGCATAAATGGCTGCAGTGCTGATGCTGACGCCAGACGGCAGAAGAAAGGTCCTGCACC
TCGACAGCAAGAGGAGCTATGTCTTGTCTGCGGCGACAGAGCCTCCGGATACCACTACAA
CGCACTGACGTGTGAAGGATGCAAAGGATTCTTCAGGCGGAGTGTCACCAAAAACGCAGT
ATATATTTGTAAATTTGGACATGCCTGTGAAATGGATATGTACATGAGGAGGAAATGTCA
AGAGTGTCGATTAAAGAAATGTCTAGCGGTAGGAATGAGGCCTGAATGTGTCATACAGGA
GCCCAGTAAAAATAAAGACAGGCAAAGACAAAAGAAAGACAAAGGAATATTATTACCTGT
TAGTACGACCACAGTCGAAGACCACATGCCCCCGATCATGCAATGTGATCCACCTCCGCC
CGAGGCCGCCAGGATTCACGAAGTCGTCCCGAGGTATCTTTCGGAGAAGCTGATGGAGCA
GAACAGGCAGAAGAACATACCACCATTGTCGGCGAATCAGAAGTCTCTGATCGCGAGGCT
CGTGTGGTACCAGGAGGGATATGAGCAGCCCTCCGACGAGGATCTCAAAAGAGTAACGCA
GACTTGGCAGTCGGATGAAGAGGACGAGGAATCCGATCTACCCTTCCGCCAGATCACGGA
GATGACGATCTTAACGGTCCAGTTGATCGTCGAGTTCGCCAAGGGTCTACCGGGCTTTTC
GAAGATATCACAGTCTGATCAAATCACCTTATTAAAAGCCTCGTCCAGCGAGGTGATGAT
GCTGCGGGTGGCGAGGCGATACGACGCCGCGTCCGACAGCGTGCTGTTCGCCAACAACAA
GGCGTACACGCGCGACAACTACCGCAAGGCGGGCATGGCCTACGTCATCGAAGACCTCCT
ACACTTCTGCCGGTGCATGTTCGCGATGGGCATGGACAATGTGCACTTTGCACTGCTCAC
GGCCATCGTTATATTCTCAGATCGGCCCGGGCTCGAGCAGCCGTCGCTGGTAGAAGAGAT
CCAGAGATACTACCTGAACACGTTGCGAATTTACATCATCAACCAGAACAGCGCGTCGTC
GCGCTGCGCCGTGATCTACGGCAGGATCCTGAGCGTGCTGACCGAGCTACGCACGCTCGG
CACGCAAAACTCCAACATGTGCATCTCGCTGAAGCTGAAGAACAGGAAGCTGCCGCCGTT
CCTCGAGGAGATCTGGGACGTGGCGGAGGTGGCCACGACGCATCCCACGGTGCTGCCGCC
CACCAACCCGGTGGTGCTATAGCCTCCGCCCGCCCCAGGAGAGAACGCTCATAGACTGGC
TAGTTTTAGTGAACGTGCGCTGATCCGTATTCGGTGACAGATTAGTGATTATATGTGTTG
TTGAACGTTTGGAGAGTATATATATAGTGTTGACGGCGAGGCCCGTCCGGCCCCGTACTT
GTTTCGTTTCTGACCGGATGCTGCGTCGGTCGCGCCCTTGCGACCACGATAAGACTACTT
TCTATAAGTACGTCTCTAAATTGAGGCCCCAAGAACCGGAAGCCTAACTAAGATACGACG
GTTTATTTTATCACAGAGGAAACTGAAGTAATTAATATATTAACAGTTAACACAGGTTCA
AAGCAGTTAGGCCGCTCCGGACTTCTCATGGTCTCAATAAGGCGGACGTATAAGAGTTAC
ATAGAGAATAAAATAATAATATATGAAGAGATGTTTCTATTGGATGGAATGAGTGATGTA
AAGTTGATAGTTATTTTTATTTACCAAATTAATGAAGAGTCGGGTGTAGACCTTTTGTAA
GTGATGTGGCGAGGAGTGGATCGCAGTGTCGGCCGCGTGCTCTCAGCAAAAGCGTGCGGT
CGACGCTAATAGTGCGATGGTTTTGGAATATGTTTGTTTATATATAGTTTATGTGTGAGG
TGTTATCGTGTCCCGTCAATTTTAATTTCGATTCGCGTTCATTCGTCCTGTGCTCGCTAC
TCAGATTAAAAAAAAATTATCGTTACTGTGATTTAGAACACGCTGTATCTAATTTCATGA
TGAGAATGTGCGAAATGAAAATTCACGTGTAACTAAAACTGGATAAGGTTTATGATAAAT
TTCTTTGAGTACAATATAAATGAGTTGTCATCGGTGACTGGGCCACAGTACGACCTGATT
ATATTCACACGCATATGAAGACAGATATTGATTAATAAATGTTTAGATACATCGCGGTGT
CCTCAATAATTTCTTCATTATATAAATCTTCAATAAATAATCTTTTTTATATTATGTTTG
CAACGTTGTTAGCGTGTTCGATGGCAACTAGATTGGATATTAGATATGTATATAGACGTC
GCGCCATCTGTATTCGTTTAGGTTAAACATTAAAAGTACAAAAGCAGCTAATTTATCTAT
ATGATGTTTTCGTTCTAATAGCAAAGTTCGGGCGAGCTTACTGTGGGAACAAACTTAGTC
GAGAGTGGTAGATGACACGCAAGCAACGTTGCCCGGCATCTAGATGTCTTCATTAGTTTT
GTTAATGAACTATCTGACTTGTGACATTCACATAAGGTTTAATTTGATTTGTACTAAGTA
CCAGTCAATATATTTTCAATAAAAGCATCATTGGCAAATCTCTTTGTCAGCTCGCCGCGG
TTCGAAAAGTGGACAACCAATATTACAGTACAAATTTGAGACTTCAACCTCATGTCTCAA
GAAGGGCCGTGAGCTCGTTTGCCAATCTAAAAAAGTTAATCAAATAAAAACAAAAGAACA
AGATTAAAAACATCGTGTCTAACAAATCTACATTGGCGTGACGCCAATGACTTATTTACC
TAATATTACTAAATATTTTTTGATACATTTTTGGGAAAAAATCTAACGCGATTTAAAAGT
GTTACAAACGATTCTAAACAAACTACCCTCAGATTTCGTATATACCAAATCAAGACAAAC
ACAAAACAACTTATTTAACTGAAATAATCACAAACGAAACTGTACCGTAACGACGCTAAA
ATACAGTTGTTTTAGGATCAGCTAATTGTGTCTACGCTGTTGATGAATGGAAATATAGTA
AATAAAATCTAAATTTAATCGATCTCATTTACCGGTAATCGTGATAAGCACGTATTGAGT
TCGTAATCTGAACTCGTTTAGAGCACTATATGAGTCACTCAGTACTCAGTGTCCGTCTCG
AAGCCTTCTGTCTCCCTCTAACATTACATAATTGTAATTTATTGTCACACCATATCGTTT
TCTCGCTCCGTATTCACGCTAATATCTCGTCATCTGTAAACTTCGCGATAAATATGCTAA
TAATAAGTGTCTGTTTGGCGTGTTCAATGTGTTTAGCGTACCGTAATTTGTGTGATTGTT
GTTTATGAAATTCATTTCTGTACAGGATGTGAGCTCCCGAAGTCGAAAGCTACAAAATAT
ATTTATTACCTTAACTTAAGGAGGAAAACAATCGTTTGGTGCTTGAGCCCGCAATGCGTG
CGAGTGACCGCAGTACGAATCACGTAAAAATCATGGAACAAAAACCGCAATGGATTCTGT
ACGCGTTCCATTGAGGGCTCACTAAACATGAGACATTATTATCAAATGAATAGCGGTCTC
CGTTTCGGGAGAATTATCCTGTATGTAAATATATACAAGCGCGTCACGATCGAACCTGCA
CCGAGGACCGTGCTAGTTCGCTTAGAGATAACTCTTCGATTTAACTTAGCATTAGTCGTA
CATAGCACAAATTATCACTGGAGTGTCTTAAGCCTCCACGGTTTCAGAGGCGCATCGATA
ACACACACTGCCATTACAAACGTATAATATACACGGTGCGATCTCGTATGCGTGATCATA
AATTCACAGTTTTTATCTAAAGTCGATGAATCTTTCATACGTCGCGATTGTAGTCTTTAG
ATGTTAATCGATCATGGAAATATTAGCTACGATACGTTGCCTTATTAGTGCGGTGCGATC
GTGGACAACGTTAGGATTCGCTCCGCGTTCGCATTTCGCCTTCGACAAATATAACTGCCA
TACGATAAGTAATAAATGTTATACGTCGTTCGTCGCGTAGGTCTCATGAATAGCTTCATA
GGATCCGGCTTCCGTCGGTGCACGAGCGATCGTGTTTGTCGACGTTATAATCATCGACAA
CGTAATAAATAAACTGTTAGTATTTAATAATCTCGAACGAGAAAATAATAATAACTACCA
TAAAATTAATTCGTGTCTTAGCTGATAATGAGAGAATATGATAGTTGTGTGTCTGATTGT
GACGACGGAGAGACGGCACACGCGAGCGACCACGTGCGCGTAGTTGAGTACAGTGAAGTA
CAGTCGAATACAGTGTGGAGTACAGTGCAGTACAGTCGAGTACAGTTGACTACAGTCGGA
ATGGACGGTGCGGAGCCGGCGTTGCCGGTTGGATGCCTTCGAGAGTTTTGTTTGAGGTGG
ACCGGTCGGGAGTCTACCGCTTGTCCATTAACTTGTACATAGAGACCTATAGATCCTATT
GTCATATGTTTGACATATGTACCTTTAGTTTTATTCATCTAAGAAGTACAGATGGCTGTT
GTTATTTTTATATTATTTGGGTATATTTTTTTTTTTTTGTAAATGACCTCTGTATTTATC
TTTTGTAAGCTTTGTAAGCCATAGGGACTTAGAATAGTGTACGAGCTGCGAACATTGTGA
TTGCTGTTTTCTCTAATTTCGTATTTTATTGAGACAATTCGTTCTGCGTATGTATTCTTC
GTTTCGACAAATATTTCTTAATATTTTTTTTTTTTTGTTATTTCAGAGTGCAATATGTAC
AAATATTTACATATTAATTGTACAGTCAATTTTTAGTTTTAATGTGTCAACGCAATATAC
TAGTGTTCGTTCGTTGAATGTACACGAAATGCATAATAATATAATAATTCGAAATCACAA
GTGAGTTGCGATGTGACGTATTCACTCTCAATATTGTGTTTTTTTTTTTTTAAATACTTA
AGGGAATAATTTTATAATAGAAAGACTAAACTAAGCGAACTTTGTATTTAAACTATTTTT
TTTTTGTAGCAGATTAGATTTGTTTACATAAGACGAATAATGTACATTTTGAATTAATTT
TAAAGTGATTTAGTTGTTATTTAGTAACGAATTTTCTTATAAGGTGTAACTGGCAGCCCC
GCGGTTTGGCTAGAATATTGATACCAGTGCTATGTGTGCAATCTCTGTTAGTGGATAGCC
GCTTCCTACACAAGTGACCATTCCGTGTACACTTGATTTATATTATGTTATTTTATTTAA
ACGTGACATAAACTTGTTTCCCTCCTAATGTATTTGTTTTGCATTGATTATTGTCTGTGT
TATGTTTAACGACAGCGGTGAAGCGAATTAGTTATAGGGATATAGACATGACGATACGTT
TAAAAACTTTATAGAGTCAACTTTTATAAAATGATAATAACCAGAGAGACAAAACTAAGA
AGGTGGGTACAAAAACGAGGAAATTTGTATGAAATATTGTTATGCGAATAAACTTACACC
TCAAGG
(6306 bp)

- SilkBase 1999-2023 -