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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c9985_g1_i1
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		sorting_nexin_lst-4_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0006886 P intracellular protein transport
GO:0007067 P mitotic cell cycle
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0019902 F phosphatase binding
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:0043621 F protein self-association
GO:0045335 C phagocytic vesicle
GO:0051020 F GTPase binding
GO:0090386 P phagosome maturation involved in apoptotic cell clearance
GO:0090389 P phagosome-lysosome fusion involved in apoptotic cell clearance
Transcript
Level		FPKM:48.24 TPM:25.10
ORF EntryO_BomoMSG2071_5prime_partial:A_BomoMSG_c9985_g1_i1
Sequence
(Nucleotide)
TAGCTATAGAAAACAAGTTTTGTTAATCTGTCAAACAGATGACTGTACATTCGGGGTATC
CGCTTTGAAATTACGTTTTATACTGAAAAACAGTACGGGTCTTAAAATGGCGACCCAAGT
GCAGGCTTTGTATGACTTCACTGGTGAGCCTGGCACCACAGAGATGTCCATAACTTGTGG
AGAGGTGCTCACACTGCTCAACACAGAAATCGGAGAAGGCTGGTGGGAAGGAAAAAAATC
TAATGGAGAAACTGGTCTATTTCCTGCTGCATATGTCAGAAAACTGACACCAGAAGAATC
AATTCAAACTAAAGCTGCTCCTCCAGCACCTAGATATGATCAAGCAGCAGATGACTGGGG
CGAACAACACTACAGTGCAGGAGATAACAATTACCAAAGAGGAGTTTCGCATGAAGATGG
CTGGGATGATGACTGGGAAGATGATACATACTCAGAGATAGGACCAGCCCAGCAACAAAA
CAAGACATCGCAGTACAACCAGCAATCATCCATTGTGATTCCCGGTATGCCTATTAATGA
TTATAATCAACACATAGATGACACATCTTCAAATTATAGCTCATCAGTGGGCACAGTTAG
AAAAAACAAATTTGCACCATCTTCAAAGATTAGTGGAGAAAGCTACCTGCTGGCAACCCT
TAATGTAGAAGTACCAGACTCTGAAAAGGTCTACATTATCCAAGATGAAGATGGATATAT
TTGGTCCCCAATTACTCAGCCATATATTGTGACTGTGGCCTCTCCAAAAAAGGAATCTAA
ATTCAAAGGGATCAAGAGTTTTATAGCCTATCAACTGACTCCTTCATTCAATAATATTCA
AGTGTCCAGGAGATACAAACACTTTGACTGGCTCCATGAGAGACTACAAGAAAAGTTCAC
ACTTATTCCAATCCCCCCTCTGCCTGACAAACAGATATCTGGAAGATATGATGAGCAACT
AATCGAACGCAGGCGAGTTCAGCTCCAAGAGTTTGTAGATTGGATGTGCAAGCACCCTGT
GCTCTCCAGAAGCGAGGTTTGGCAACACTTCTTAACATGTACTGATGAAAAGAGATGGAA
AGCTGGTAAAAGGCAAGCTGAAAAAGATAATTTGCTAGGTCTAAATTATTGTGTTTCACT
AGTGGTACCTGAGAAAGCATTATTGCAATCACAAGTTGATCATATCACAGAACAGTGCCA
CACTTTCATTAACAGTGTCGACACAGCCATCAAGTCTGTGTCTAGCATGTGCATTGTGCA
AACAAAACGTTTCCAAGGACCATACAAGAGTGACTGCCAGAAAATAGGAGAAGCATTTTA
TAGTCTTGGCAATGCCTTAAGCTTGGATGAAGGTACCATAGTATCAACATCTAAGCTGAC
TTCAGCTATTAAAATGACAGGTGGTGTCTACATTGATATTGGTAGGATGTATGATGAACA
ACCGAAGTATGATTGGGAGCCACTGGGTGATAAATTTCATTTATACAAAGGAATTGCAGC
TAGTTTTCCTGATGTCCTGGCCAATCATAAGGGTGCAGTGCAAAAGAAAAGAGAGTGTGA
AAGACTGACTGCTGAAAACAAAATGGAGGTTGCACAATTAAATGAAGTCTTGAGAAGGAC
CGATGTTATATCATATGCGCTTCTTGCCGAAATCAACCATTTCAAATCAGAACGGACTGT
TGATATAAAAGCCACCATGCAAAAATTCTTGAAGCAACAAATCAACTTTTACAAGAAAAT
AGTAGATAAGTTGGAAACCACGCTAAGATACTATGATGATTAGATTTAACTTAGGAATTG
ATATTGAATCTAATATAAATTGTATCAAGAAGTTTTGAATTGGAAAATTTATGGGTGTTC
AGTATTTGATTATGAATATTTTGTAGAAGTCAATTTTCACCAAAAAACACAATATGTATC
TTGGAATTTCTAGAAATTTGGAATTTGATTCTAATTTACTACATAAAACATAGCATACTA
CGCAAGCTAAATAAATCTGAACATTATTATAAATGAATTTATGATGTGATGATATTTCGG
ACTGAACGTAAACTATATTATGATTATTCTGTTTTGATGTAGTTTTATTTTTACAAATCG
AAAAATAACTTGTAAATATTTTATGAAGTCTAGTTTTTTTTTGAACATGTG
(2151 bp)

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