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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c9438_g1_i1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		DNA-directed_RNA_polymerase_II_subunit_RPB9_[Bombyx_mori]
Ontology
GO:0001193 P maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005730 C nucleolus
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007067 P mitotic cell cycle
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0008270 F zinc ion binding
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
Transcript
Level		FPKM:48.77 TPM:25.37
ORF EntryO_BomoMSG1931_3prime_partial:A_BomoMSG_c9438_g1_i1
Sequence
(Nucleotide)
TTTTTGTTTACTAAACTAAGCAAAAACACCAGTGTGAACATAATGATAGACGTAAAATTT
AATTACTACACCTCTGTGTAGTCTTTCATGTCAATTGTCAAGTTTAGTGTTAAAAAACGA
TTCGAGGTGGTTATATTATCTTTGAATAGGACATTTTAAAATTAACAGTAAGGAAATGAG
TGCTATAAGCTTAAGTAGAAAAGACGGCGGTCCTGGTTATGTCGGCATACAATTTTGTCA
AGAATGTAACAATATGCTTTACCCGCGCGAAGATAAAAATAACAAAGTTTTGCTGTACGC
GTGCAGAAATTGTGATTATAAACAACTTGCGGATTCAAATTGCGTTTACGTCAACAAAAT
TATGCACGAGGTAGACGAATTGACGCATATAAACCCTGATGTAGTAAGCGACCCGACTTT
ACCTAGAACCAAGGATCACATGTGCCCAAAGTGTAATCACAGAGAAGCAGTATTCTTTCA
AGGCCAGACGAGACGCGCCGAAGAAGAAATGAGATTGTATTATGTGTGTACAAGTTGTAA
ACATAGATGGACAGATCGGAAGAGCGTC
(568 bp)

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