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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c9350_g1_i1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		probable_ATP-dependent_RNA_helicase_DHX34_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006396 P RNA processing
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
Transcript
Level		FPKM:3.12 TPM:1.62
ORF EntryO_BomoMSG1900_internal:A_BomoMSG_c9350_g1_i1
Sequence
(Nucleotide)
TCAGAAACCTTACCTAGCTATGATGTCATTATCTTAGATGAGATTCATGAAAGGCATTTA
ATGGGTGACTTTCTACTGGGTATTTTAAAATGCTTGGTACATACTAGAACCAATATTAAA
TTAGTGTTGATGTCTGCTACAATAAACATAAAACTGTTTGAAGAATATTTTGCAAGTGAA
TCGGCTGTTGTTATACAGGTACCAGGTCGACTTTATACAATTGAATTAAATTACAAACCA
ATATTTATGGAAGAAAGACCGACAAGAGATGACAGATTAGATCCTCAGCCTTATGTGCAA
ATAATGCAGTTGATCGACAATAAATATCCAAAGGATGAACGAGGTGATCTCCTAATATTT
ATGTCTGGAGTTCAAGAAATCACAGCGATATGTGACGCGGCGCAACAGTATGCAGAAAAG
ACGAAAAATTGGATCGTCCTTCCATTACACAGCGGTTTGTCACTTGCCGAACAAGATAAG
GTTTTCGATTATCCACCAGAGGGCGTCAGGAAATGTATTATATCAACGAATATAGCAGAA
ACCTCTGTCACAATCGACGGTATTCGTTTCGTTGTGGATTCCGGAAAGGTAAAAGAAATG
AGCTACGACCCGACATCGAAGATGCAGAGGTTAAAAGAGTTTTGGATATCGAAGGCCAGC
GCCGACCAAAGGAAAGGTCGTGCCGGAAGAACGGGTCCCGGCGTCTGCTATAGGATATAT
TCCGAACAACAGTACACGGATATGGAGCCGTTCAGTACTCCAGAGGTGTCCAGGGTCCCG
CTGGCCTCTCTGCTCCTGTTGATGAGCTCTTTAGGGGTGAACGACGTCAGGCGCTTCCCT
TTCATCGATACTCCGCCCGAG
(861 bp)

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