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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c8693_g1_i1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		peptidyl-prolyl_cis-trans_isomerase_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0000974 C Prp19 complex
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006457 P protein folding
GO:0006909 P phagocytosis
GO:0016853 F isomerase activity
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:28.31 TPM:14.73
ORF EntryO_BomoMSG1790_complete:A_BomoMSG_c8693_g1_i1
Sequence
(Nucleotide)
TGTCATTCTCTTTGAGGTTATGTTTGATATAAACAAACCGCTATCGGCGCTATCACACAA
ATAGTTAGCTATGTACCTAAATTTCATTTAAATTTCGAATAATTTAATATAAACACACGT
GAAAATGTCGAGTAAGCCTAATTCTAAGCGGACAATATACGTTGGAGGGCTAGCTGAGGA
GGTCGACGAGAAAGTTTTAAACGCTGCTTTCATCCCTTTCGGGGATTTGGTTGATGTTCA
AATACCTTTGGATTATGAGACTGAGAAGCATCGGGGCTTCGCTTTCATAGAGTTCGAAAA
CGCTGAGGATGCTGCCGCAGCGATTGATAACATGAATGATTCAGAACTATTTGGTAGAAC
AATACGAGTGAACATAGCAGCTCCGCAACGCATTAAAGAAGGCTCCACACGACCTGTCTG
GTCGGATGACTCATGGCTGCAGAAACATGCTGGGGAAACTCTTCAACTGAACAAAGATGG
TGAAGAAACTGAAACGAAAGACAAAACCGAAACTACTAGTGTCACACCATCGAAACCGAT
AGAGAAACGCAATCCTCAAGTGTATTTCGACATAAGTGTAAACAAACAAGAAATAGGCCG
TATAATTATGATGCTTCGAGCCGACATAGTCCCAAAAACAGCGGAGAACTTTCGATCTTT
GTGTACACACGAGAAAGGTTTCGGTTACCAGGGCAGTAGCTTTCATCGAATCATTCCAGA
ATTCATGTGTCAAGGAGGAGACTTCACGAATCACAACGGAACTGGGGGAAAGTCTATATA
CGGCAGAAAATTTGAAGATGAAAACTTCGCATTAAAACACACCGGCCCCGGGGTTCTAAG
TATGGCTAATTCCGGACCCAACTCGAATGGATCACAATTCTTTCTTTGTACTGCAAAAAC
AGAATGGTTGGACGGTAAGCACGTGGTTTTCGGTCACGTGATCTCCGGCTTGGACGTGAT
GAAGAAGATGGAGAGGTACGGCAGTAAGAGCGGAACGGTTTCAGCGAAAGTTGTCATAAG
TAATTGTGGAGAATTACAATGATTCTGATGAAAAAAAAAAAGATCGGAAGAG
(1072 bp)

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