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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c7441_g1_i2
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		protein_DEK_isoform_X3_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0008150 P biological_process
GO:0016568 P chromatin organization
GO:0042393 F histone binding
GO:0043292 C contractile fiber
GO:0044822 F RNA binding
GO:2000779 P regulation of double-strand break repair
GO:2001032 P regulation of double-strand break repair via nonhomologous end joining
Transcript
Level		FPKM:20.18 TPM:10.50
ORF EntryO_BomoMSG1510_complete:A_BomoMSG_c7441_g1_i2
Sequence
(Nucleotide)
CGTGCATTTGTGTTGTCCGGTGTTTGAAGACGCTTGGAATTCGCTTTCAATTTCTTCGTA
GGAAAAATGTCGGGTGATACCGATAAAGCAAAAATCAGTGACAATCAGGATGAAGACAAG
AAATCCAGTACTGGCGATGGTCAAACAACTGAAGACGAGTCATCCCAGGACTCGAAGGGT
GACGTAAAGACGACAGCCAACGGTAAGGATGACGAGACCGGCGGTGATGACTCCAAAGAT
GAAAAGGATAAAACCGATAGTGATACTAAAAAGGAGGAGAATGGTGAGACACACGATGAA
GATGAAAAAGACGATGTGAAGAGTAATGATAAGGGCGCAAAGAAAGCGCCCCCTAAGAAG
AAACCTAAGAAAGAGGATACTGAGGAAGAAGACGAGGATGACGAAGAAGAGGAAGAGGAA
GAGGAGGAGGAGGAGCCAGAGGAAGGAGATGAAGATGATGAAAAGGAGGACAAGAAAACC
AAGGATAAAGTGAAGAAGCCGGCAAAAAAAGCAAAGGGCGATGACGATGAAGGTGATGAT
GATGAAGGTGAAGAGGACGAAGAAGAGGAGGAGGAAGAGGAAGAAGAGGAGGAGGAAGCT
CCTAAACCCAAGCCCAAGAGAGAGCCTACGGAGCCGCCGGTACCGCTACCCGCTGGAAAA
GGTATCCCGCTCGGGCACATCAGCAATGTGGAAGTATCGTTGTCGCGATTCAAGACCCAA
GATCAGAAACTACTACATCAGTATTTGTATGGGCAACTTTGCCTGGATCGTAATGTTAAA
CGCAACATCAAGAAGTTCAAAGGCTACGAATGGGCAATCGGCTCGTCCGACTACAAGGCT
AAACTGGAGGAGACCACCAAGATGGAACCCAAACAGTTGCGTACAATGTGCGAAATGCTT
GATTTGGATAAAAAAGGGTCGGCGTCGGAGCTGGCGGGGCGGCTGGTGGGGTTCCTGCAG
CAGCCCACCGCCAACAGTCCGCACGCGCGCGGCGTGGCGCGGCCCCCGCCCGCCCCCACC
TCCACGCCCGGCGGCCGGCCCCGGAGGTCCGCCGCCGTCAAGGTGCATAACAGAGGTTAC
TCTGATGAAGAATATGAAACTGATCCAGAACCGAAAGTCAAAGGGCCGAAGCCCACTAAA
GAAGGTTCCGAAGATTCAGACGGTTCATTCAACCCGAGTGGCTCGGAGGAGGCGGATTCG
GACTTTGATCCTGAAGCCGGTGAGGGTGTCGCGAAGAAACGTGCGCCGCGGAGACGATCC
GCCGGGAAACCCACCAAACGGTCCTCCAAGAAGGGCAGCAGCAAGGGGAAGAAAGGAAAG
CAGGCTAAACCGAGTCGCGGCAGACGAGCAAAGTCCGAAAGCGACGAGGAAAGTGAAAAA
TCTGAGAGTGAAAGCGACGCAGAGTCCGGTAGCGACGGAGAGGAATCAGATGAGCCTAAA
GCGAAGCGAGGACGGCCATCGGTGGTAGCTAAGGGACGCAAGGGTCCGGTCGCAAAGAAT
TCTAAAGCAACGCCCGTAAAACGGAAAGCACCTACGCCACCTGCTAAAAAGAAGGCGGTA
GCTGGTAAAGCCGCAGCAGGTCGACCGGCCAAGAAGGGGAAGAAGGCTTCGTCCGACGAA
GAGTCTGGCGACGGAAGCGAGGAGGATGACGACGAGGAGGAGGCCAGCGACGACGAGAGC
GGAGACGACTCGGACGCGCCGACCGACAAGAAGGCTAAACGACCGCCTACTGATGAAGAA
ATAAAGAAGTACGTGAAGCAGATCCTGGAGGGCGCGAACCTCGAGCAGATCACTATGAAG
ACTGTTTGCAAGCAGGTCTACAGCCACTACCCGGACTTTGACCTCGCGCACAAGAAGGAC
TTCATCAAGGCCACGGTCAAGTCGTGTATTTAAGATGTTAGGAGTTAAGGGAGCAGTGTA
GATGTCTACATAGTATACCTATAGTTTATAAAGGACATAGTTATATATTATTACAATAAT
AATATATTATGAAAATAAAAGTTTAATTAAAAATAATAATAAAAAAAAAAAAACAATAAA
ATGAAGTGGAACGGATAGACACCCGCTTTACTTTACAAGCTTATATCATCGTGAGCGACG
AGCCCGGCCGCATCCTACACATCTAGTAAGAAACACCACTCCAAACGAAAATTAGATTAA
TTGATCCCGTACTGGCGTCGACGCAGTTTTTACACATTATAATTCTAAACGTTCTTTTTT
GTTGATACGAACTTTAATTTTTTTTAATACAATACTTTTTATGTATTCAGTTCGACGCAG
CATGGGTTGTAATTTTATGTTATAGGTATATAATTCCCTTAGACTAAGTTTAAAATTAAA
CAATTTTAGATGTGTAAGGGATGCTTTATTTTTAACTGTGCCTGTTTTTTTTTTTTAATT
TGTTGAAAAGTAATTGTTTTTCTAAAATTTTTTTTTTTGTAAAATTAACATGACGTAAAC
GACAAAAAATGGTTTTTTTTTTCTTCGTTATTACGAATAAAATATCAGTAACTGTACGTC
ATTATAAAGAATATGTATAAGACATAAAATAATCCACTACATAATTAAATAAAAAGTAGA
AATTATAATAATGTAATTTACACGATAAAGTGATATTTTTCAAAATTGTACTAAATGTAA
AAGTTGTATTTTCTTATTACGGTCTGATTTTAATGATAAACATTGCGTTTTATCTTTTAA
TCTGTTTGTAATTTCGGAAGTAACTTTGGTTTCCTTTTCATCGTATTTAGAATATTTCAC
GCAGTCTGACACTATCGCGAGAGGTCTGTCTAGCTATCGAATTAAGATGTAAATTTAAGA
TGTGTAAATAAATACACATAATTTGCATGGTTATCATAATAGGGCTGTTTGTAAATTCAC
ATTAAAATAAACAGGACTCTATTTGAGTCGTGTATTATCAAAGGTGGCAATCTGTG
(2936 bp)

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