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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c6393_g1_i1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_RNA-binding_protein_NOB1_[Bombyx_mori]
Ontology
GO:0000469 P cleavage involved in rRNA processing
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0007601 P visual perception
GO:0030490 P maturation of SSU-rRNA
GO:0030688 C preribosome, small subunit precursor
GO:0042274 P ribosomal small subunit biogenesis
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:46.98 TPM:24.44
ORF EntryO_BomoMSG1385_complete:A_BomoMSG_c6393_g1_i1
Sequence
(Nucleotide)
TTTCTTTCAGAATTCACACGTGAGCTAAACAAGTTCGTTTTGCATAACGAATTATACACA
TGTAAAGTTAATATCGTGATTAGTGTTCAGCGCAATGCCGAAGTCTATCAAGCATCTGAT
TGTGGATACCTCTGCATTCATAAGGGCGGCAAACCTTCAAGACATTGCTGAAAATGTTTA
TACTATACAAGAGGTTATTGATGAAATAACTAATGATAGGCAAAGAAAAAAGCTCGTTGT
CCTTCCATACGACTTAAAAGTCAAGGATGTCTTCGCAGATAACATAAAATTCATTACTGA
ATTCTCGAAGAAAACAGGTGATTATTCTAGCCTCTCTGCTACAGATATTAAGGTTATGGC
ACTGACCTACCAGCTAGAGAAGGAGAAGGTTGGCGGTACGGAACATCTCAAAGATGAACC
GACTATGCAAAAATCTGTTAAAGTTACAGGATTGGCTGGGTTTAACCTTCATCCCAATTA
TGAAAATGCCAATCAGGAAACAGGTGAGAAAGACTCTAATGCAAACAATAACAAAGAGAC
CAGTGAACCTTTACAACAACCCATAGGAGAGACTGTGAATGTTGAAACTGGAGAGTCATT
TGAAGTCAAACACCAACAAAACTGTCAAACAACAACAAATGAAACTGATGATGATAAACT
GGCTGAAGAAATTTCAAAACAAATCAATGATATGGATTTGAAAGATGACAAAGTTGATGA
GCTAATGGTTAAAGTCTCTGATGAAGAGGCTACAGACAGCTATGATGATGATGATGATGA
AGACGAGACAGATAGCGATGGTGGAGAATGGATCACAACCAAAAATTTGGCTGAAAAACG
AAAAGAGATGGAACTTGGTGAATTCAAAGAAAAAGATGTTGAAGTTGCCTGCATCACTTC
GGACTTTGCAATGCAAAATGTTTTAAAGCAGATAGGACTAAATGTTACATCAATAGATGG
AAGAATTATAAGACAATTACGTACATTTATTTTTCGTTGCACAACCTGTTTCAAAACAAC
TAGTGTAATGACAAAACTGTTCTGTCCTAAATGTGGTCATGCAACTTTAAAAAAAGTTGC
AGTGAGTATTGATGAAGATGGTAATCAAAGAATACATATAAATGGACGTAAACCTTTAAC
AGCAAGAGGAAAAAGATTTAGTTTACCTACACCAAAAGGTGGTCAACATTTTCAATACCC
AATTTTAACTGAAGACCAGCATATACACAAAAGATTTGTTACCAAATTAGCAAGAAACAA
AACAAATGCTCTAGATCCTGATTATACTGCAGGATTTTCTCCATTCGCAATGAAAGATGT
GAATTCCAAATCGGCTGTCTTGGGGGTGCGTGCCAACAATCAGGACATAAAATATTGGAT
GAAGCATTATTCTAAAGGAAAGAAGAAATAAATTGAAACAAACACATTCTTATTTATTAA
CTAACTAGGTACATAGACATAAATTTAACATTAATAAATGCTCATTCTTAAACATAACCA
GAGAATAAAAATTCGCTATTATAACAGAGTAGTACCACGTGAATATTCGTTTTAATCCAT
ATTTAGTATTTCATCAAAGTATTTAAAAACAGAATCCATACACATGTATGATGTCATTTC
ATGTTTCTCATGACCTGCAAACAAAGTTTTCTTATATATTTGACACAACACAAATGCAGA
GTTTCAGTGGTTTAAGTCAACCTTTACCAATGGTTGCTTCAATGTTACTATTGCAGCACT
TAATAGTAAGCTTTTAGCTGAACCAGTGATTAATGCTCAGTGTTACTCATGGACAAAGGC
AGTGCAGATCGGAAGAGCGTCGT
(1823 bp)

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