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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c6183_g1_i1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		probable_ATP-dependent_RNA_helicase_DDX47_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008380 P RNA splicing
GO:0008625 P extrinsic apoptotic signaling pathway via death domain receptors
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
Transcript
Level		FPKM:35.25 TPM:18.34
ORF EntryO_BomoMSG1354_5prime_partial:A_BomoMSG_c6183_g1_i1
Sequence
(Nucleotide)
TTACTTCTTTGGTGACACATACGTCACATATTATATGTGATAGATTCAGAAATCAGAAAT
CAGAAATCAGCATACCCCTAATTCAAACACATGCTTTCAATATTCGCGTCTTTTTTGTAT
TCCCCAAAACAATGATAATTTAGAGAAAATGACTGCAGACAAGGAAAGCTATGGAGACGA
AACCAACCAGGATAGTGAGGTGGAACAAACTCCAACCGAAAATGTCAACGAAGATACTGA
AGATGATAAAATAACATTTAAGGATTTGGGAGTTGTAGACGTACTCTGCGAGGCTTGTGA
AGAATTGAAATGGAAGAAACCCTCTAAGATTCAAAAAGAAGCTATTCCCGTCGCGTTACT
AGGCAAAGATATCATTGGTCTTGCCGAGACAGGTTCTGGTAAGACAGGTGCCTTTGCCCT
GCCCATACTTCAAGCACTACTGGAGAACCCGCAGAGATATTTTGCACTTATACTCACACC
AACAAGGGAACTGGCATTTCAGATATCAGAACAATTTGAAGCACTTGGTGCAAGCATAGG
TGTAAAATGTGCAGTAATAGTTGGTGGTATGGACATGGTGGCACAAGCACTAATGCTATC
CAAGAAACCTCACATAATCATCGCCACTCCTGGAAGATTGGTTGACCACCTGGAGAATAC
CAAGGGATTTAATTTAAGGCCTCTAAAATATTTAGTAATGGATGAAGCGGATAGAATTCT
CAACATGGATTTCGAAGTGGAAGTGGACAAGATTCTCCGTGTGATACCAAGAGAACGCCA
CACTTATCTCTTTTCTGCAACAATGACGAAGAAAGTGCAGAAGCTCCAAAGGGCATCATT
ACAAGATCCTGTGAAAGTGGAGGTGTCTACAAAGTACCAGACTGTTGATAAGCTTATGCA
ATCCTACATCTTCATACCTGTTAAGTTTAAGGATGTATACCTAGTTCACATTCTCAACGA
GATGGCTGGAAACTCGTTTATCGTCTTCGTCTCGACGTGCGCCGGTGCGCTGCGCTGTGC
ATTATTGCTCAGAAACTTGGGTCTGGCCGCGGTACCGCTACACGGTCAGATGTCTCAGAA
TAAACGTCTCGCAGCCCTGAACAAATTCAAGAGCAAATCCAGATCGGTGTTGATCTGTAC
TGACGTAGCATCCAGAGGTCTGGACATTCCTCACGTGGACGTCGTGATAAACCTGGACAT
CCCGCTGCACAGCAAGGACTACATCCACCGCGTGGGCCGCACCGCCCGCGCCGGTCGGGC
CGGTAAAGCTATCACTTTTGTCACGCAGTACGACGTGGAGTTATACCAGCGAATTGAACA
GTTGATCGGGAAACAGCTGCCTTTATACAAGACGGAGGAGAGCGAGGTCATGGTGCTGCA
GGAGAGGGTCGCTGAGGCCCAACGTCTCACTAGAATCGAAATGAAAGAACTAGAAGACAA
GAAGAGTACGAAGGGTAAGAAGCGAGGTGCCGACTCTGACGACGACACAGAGGATGCGGT
CGGAGTCCGCAGACGAATCAAGGGGAAACCTAAACACGCTGGCAAGAAACGGA
(1553 bp)

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