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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c5756_g1_i1
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		putative_Copia_protein_[Danaus_plexippus_plexippus]
Ontology
GO:0000943 C retrotransposon nucleocapsid
GO:0003723 F RNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004540 F ribonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0032197 P transposition, RNA-mediated
GO:0071897 P DNA biosynthetic process
GO:0090501 P RNA phosphodiester bond hydrolysis
Transcript
Level		FPKM:1.18 TPM:0.61
ORF EntryO_BomoMSG1273_5prime_partial:A_BomoMSG_c5756_g1_i1
Sequence
(Nucleotide)
TTTTAAAGGGTTTTTGTTTAAAACAAAATAAAAAAAAAAAAAAAATCAACATGGCGCTTT
TCGCTGCCTGGGTCTACCATAATACTGACTTTTCCTGAGCCGCTAATTTTTGTAGTTTTA
CCATTAGCCAAATTCAAGTCTGTATCAACTCGAGTAAAATCTTCAATCAATTGTTTGTTG
TTACACATATGTCCCGTACATCCACTGTCAATACACCATACAGGAGCTCTCTGCTCGGCT
ATCATCACCTCTTTGGTGGTACTTACTAACATATTTGTCTTGTGCTCATCATCACTATTA
CATTCTGCTTTATGTGAGCTTTGTTTAAGCTTACTCACGTTTTTAGTTCTGCACTCTCTC
GCCATATGCCCAAGACGACCGCAACGATAGCACTCAATGTTTTTATTTGTGTGCTGTTCA
AAGTTCTTCTTCGGGTTGGCATTTGATTTAATATTGGTACGCTTGACGAACATAGCCCTC
TGGTCTATTATCTTACTCTTCCGAC
(505 bp)

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