SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c5499_g1_i1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		very-long-chain_3-oxoacyl-CoA_reductase_[Bombyx_mori]
Ontology
GO:0001968 F fibronectin binding
GO:0003674 F molecular_function
GO:0004303 F estradiol 17-beta-dehydrogenase activity
GO:0005518 F collagen binding
GO:0005575 C cellular_component
GO:0005578 C extracellular matrix
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0006694 P steroid biosynthetic process
GO:0006703 P estrogen biosynthetic process
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008201 F heparin binding
GO:0010811 P positive regulation of cell-substrate adhesion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0030198 P extracellular matrix organization
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:116.01 TPM:60.35
ORF EntryO_BomoMSG1189_complete:A_BomoMSG_c5499_g1_i1
Sequence
(Nucleotide)
TCGCGACTCCACTCGCTATCGTTCACTCCGTGCGCATGCTTACTTTCTTCGACGGTTAGT
GCGCATGCGCGGTTAATGTCAAGCGCTTGTGACGTGTAGTGCACTCTTCTAACTAATTTA
ACATAAAACTAAGCATTTAATTTAACAAAAATGGCCCTATCGAATCTAGAAAAACTCGGA
ATATTATTTGTTGCATTTTTTATTTTTTATTGCCTTAAATTCTTGTGGCATTTCTTGTAT
ACGTACGCCATTGGACCTGCAGTGCATTGTGTTGATTTCAAGTCCAAAGGGAAATGGGCA
CTTGTGACTGGATGCACTGATGGAATCGGAAAAGAATATGCTAAAGAGTTAGCCGCCCGT
GGATGTGACATTGTTCTAGTCAGTCGATCTCTTGATAAACTAAAAGCAACAGCTGAAGAA
ATTGAGAAAGAATACAAGGTAGCCACGAAGATAATCCAAGCGGACTTTAGCGAGGACGAT
AAGATTTACGAGAACATTGAGAAGGAAATTGCTGGCCTGGAAATCGGTACTTTGGTCAAT
AATGTCGGAGTTTCCTATACGTATCCTGAATATTTCTTGGACCTGCCAGAGTGGGATAAG
CTCATCCCAACTCTGATCAAAGCTAATGTGGTCGCTGTAACAAAGATGACACGCATCGTT
TTACCCGAAATGGTGAAGAGAGAAAAGGGCGTTGTTATCAATATCGGGTCTGCATCTTCG
ATCATACCGAGTCCGTTGTTGACTGTCTACGCTGCTACTAAGGCATACGTCGATAAGTTC
TCGGAGGGTCTCGATATGGAGTACTCGAAGAAGGGTATCGTTGTACAATGTATCCTACCC
GGTTTCGTGTGCTCGAACATGTCCGGTATTCGTCGTAGCTCGCTATTCGCGCCCACGGCC
AAGGTCTTCGTCCAATCGGCGATCAAGCTCGTCGGCACGACGACCAGGAACACTGGATAC
CTGCCCCACGCGGCCTTCGTGAACATCGTGAACAGCATCTACGAAACAGCAAACAGCTTC
GGCACCTGGCTCGTCGTCAGATCCATGGAGAACAGCCGCAGGAAACTACTCAAAAAGTAC
AAGAGGCAGTAAAATTTATCTATAAAACCCTTCCTAATCACACAATTTAATACAATAACA
GCTGCTTCCATGTAAAACCAAAGAAGGAAACTTTCGCGTTTTCAATTTAGAAAAAAAAAA
CACCCTTTATTAACAATTTTCGATCGCACCTTTCTTCTTTCCTAACTGACTAAACAAATT
TCTGTGGAACCAAAGATAAGTTATTTGTAACGTATTAACAATATGCAAGAGAGGAATTTT
GTGCCATTACGTCCTATTGAAAAAAAAATGTTCAAAAGAAACCTAGCACATACTTAATGA
GCTATAATAGTGATAAAAAAAACACCAAGTAAATTTTTATTAAAATTTCTATAGTAAAAC
AATTTAGTTTTTGAATTCATAATCCTAGCAATTTACAATTGAATATTTATCTTTACCGTT
CCCTTAGTTTCGTATAAAAATATATCATATGAAAATAAAAGTGAGCGGTATGGTAGGTGG
TATAATTTAATAAAAAAAAATATTGTATATACAAAAATAAAATCAACAATAACAAAATGT
AGACAGCTAACATAATTCTTGCATTTACGTGAAGCACGTGTGTAGTAATTAGTCACTGGG
AATGTAATTTACTATTAAGTTGGTTTAATAAATTTGGTTTAGAACAAAAAAAAAAAA
(1737 bp)

- SilkBase 1999-2023 -