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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c5476_g1_i1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		transcription_initiation_factor_IIA_subunit_1_[Bombyx_mori]
Ontology
GO:0001094 F TFIID-class transcription factor complex binding
GO:0001128 F obsolete RNA polymerase II transcription coactivator activity involved in preinitiation complex assembly
GO:0001129 F obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly
GO:0005634 C nucleus
GO:0005672 C transcription factor TFIIA complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0017025 F TBP-class protein binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051123 P RNA polymerase II preinitiation complex assembly
Transcript
Level		FPKM:43.67 TPM:22.72
ORF EntryO_BomoMSG1173_complete:A_BomoMSG_c5476_g1_i1
Sequence
(Nucleotide)
ATCTGTCGGAATCAACGAACCATAGACAATTATTTCTTTAAAGGCTACGAAATATTTCCT
CGGTTAGTAGGTTATGTTTGAGTGATCAATTGTCAAAATTTTTATGGTGAATTTATAAAT
TTGTCTCTCTTTATGTAAATGGACGTCATAAAAGTTAAAATAAGCTACTTTAGCCACATA
TTATCTTAAATATATAAAATTGGTCATCAACATTAGTGAATTAACAAACTGTGTGAATTC
CAGAAATTTGACATTGAAATGTTGCGATGTGAACTCAGAAGACAAATAATCGGCTCTAAA
CTAAACTAAACAGATTTAGAAACAAGAATATCTAGTTCTGTGAACATTTTACACTGTTAA
ACAATTTTCAACTACAGCTCGATTGCAAAATGACAACGAGTCAGCTCGCAGTATTGAAAC
TTTACAACATAGTGGTAGACGACGTGATATCCGGAGTGAGAAATTCTTTCTTAGATGACG
GTGTAGACGAACAAGTGTTACAAGAACTAAAACAACTATGGAAGACAAAGCTTCAAGCCA
GTGGAGCCACGGACCCGTTACAACCTGAGCCGATGCTGCCACCTCCTCCAGTGTTACAGA
ATTTCCAAAAAGTAAATGGTAGTAATGTAGTGCATAAAAGAACTGACATGGGACATACTT
CGGGGCAACAAGAACATAGTGCACCAGCATCTAGTGTAGCTGGAACGCATACTCATCATA
TTCTAGACCCTAATAATAAAGTGCCAGTTCAGCTTACATTACCTGCTCAACCTGGAGTTC
CAGGGTCCCAGCCTCGTTCATTTACCATTCAAATTCCAGCATCAGCTCTGAACGGCAACA
AACTGCATCAGGTCTTAACAGGTCCTATAATAAATGCTACCATTAGCCTTCCACAACCTC
TAGCTGCTACTTTACTGCAACAACATATCAACTCGGCTTTAGCAGGACAAAAAAGTGATT
TTGATAGCGGCGGAGGCGGCCGCAGTGGAACTGCTCCTTTCTCTTTAGATGGTGCTTTGG
ACTCTTCTGATGATGATGGCTCAAACGTAGGTGATGGTTCAGAAGACGGTGCAGCAGATG
ATGATGATGATGACGATTCTCCCGAAGAGCGGGCAGAAGAAGAAGAAGAAGAACAAAATG
AAAGTGGTGGTGCTGAAGAAGAACCCCTAAATTCCGGTGATGATGTATCTGATGAGGAGC
CAGGGGACATGTTTGATACTGATAATGTAGTTGTTTGCCAATATGATAAAATTACACGCA
GTCGCAATAGGTGGAAGTTCTATCTCAAAGATGGAATCATGAATCTAGCTGGAAAGGATT
ATGTATTCCAAAAGGCTAATGGTGATGCGGAATGGTGATTATAGACAGTGTGTATTTTAT
AGAAAATTATTTGTTATATCTCGGAATTAGGGCTTAAGGTCTCATAATTATTATTTCGTT
ATTTCGACATGTAATTTGATGTCTGTATGGCAGATATCTGTGTAACAAGATTACGATAAG
ATTGTTAAACAAATTATGAAAAAAAAAAAACAATCTTTAGTAGGTAGATTTGAAGTTTTC
TAAGACACTAGTATTACCAATAGTAAAAAACTCTACCAAGC
(1601 bp)

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