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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c4945_g1_i1
Scaffold_idBomo_Chr7
NCBI non-redundant
(nr)		EH_domain-containing_protein_3_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0005509 F calcium ion binding
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005811 C lipid droplet
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0010008 C endosome membrane
GO:0010886 P positive regulation of cholesterol storage
GO:0016020 C membrane
GO:0016197 P endosomal transport
GO:0020018 C ciliary pocket membrane
GO:0030030 P cell projection organization
GO:0030139 C endocytic vesicle
GO:0031095 C platelet dense tubular network membrane
GO:0031175 P neuron projection development
GO:0031901 C early endosome membrane
GO:0032456 P endocytic recycling
GO:0034383 P low-density lipoprotein particle clearance
GO:0042384 P cilium assembly
GO:0042632 P cholesterol homeostasis
GO:0042995 C cell projection
GO:0043209 C myelin sheath
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0055038 C recycling endosome membrane
GO:0060170 C ciliary membrane
GO:0061512 P protein localization to cilium
GO:1901741 P positive regulation of myoblast fusion
GO:1990090 P cellular response to nerve growth factor stimulus
GO:2001137 P positive regulation of endocytic recycling
Transcript
Level		FPKM:40.72 TPM:21.18
ORF EntryO_BomoMSG1055_complete:A_BomoMSG_c4945_g1_i1
Sequence
(Nucleotide)
GGCTAATATGATGGTGGTGGTCTTTTAAGTCTCTGCGGATTTGTAATAAATCTAATACAA
AAGTGGTGCAGTGAGTGTATCAGTGCCTCGTGTCTTTTCAGTTTTTTTTAAAAGGACATC
AAAACACGTTCATTATGTTTAGTTGGCTTAAGAAAGAAGGTGAAAAAGCGGAAAATATTG
AAAATGTCGTGGAAGGGCTCAAGAGGATTTACAAAACTAAACTGTTGCCTCTTGAGCTGC
ACTACCAGTTCCACGATTTCCATTCGCCGCAGCTCGAAGATCCAGATTTCGATGCCAAAC
CCATGATACTTCTCGTGGGACAGTACTCCACCGGTAAAACGACATTTATCAGGTATTTGC
TAGAGAGAGATTTTCCGGGCATCCGTATTGGTCCAGAGCCGACTACAGATAGATTTATAG
CCGTTATGTTCGACGAAAAAGAGGGCGTAATTCCGGGTAATGCGTTAGTAGTAGATCCGA
AAAAACAGTTTCGACCATTGAGTAAATTTGGTAACGCCTTCCTGAACCGATTCCAGTGTT
CAACTGTCACGTCGGACGTACTACGCGGGATCTCTATCGTTGACACACCCGGTATCCTAT
CTGGAGAGAAACAGCGTGTAGATCGCGGGTATGACTTTACTGGAGTATTGGAATGGTTTG
CTGAGCGTGTTGACCGAATCATACTTTTGTTCGATGCTCACAAACTTGATATATCAGATG
AATTTAGGCGCAGTATAGAGGCATTGAGAGGACATGATGATAAGATCCGAATTGTGCTCA
ACAAAGCTGATATGATAGATCATCAGCAGTTGATGCGTGTTTATGGAGCTCTGATGTGGT
CACTGGGAAAAGTTTTACAAACTCCTGAGGTTGCTAGAGTGTACATTGGCTCATTTTGGG
ATGAGCCTCTCCGGTACGATGTTAATCGTCGACTTTTTGAAGATGAAGAACAAGATTTAT
TTAAAGACATGCAGTCTTTGCCAAGGAATGCTGCCCTGCGTAAACTAAACGACCTTATTA
AAAGAGCACGACTTGCTAAGGTTCATGCATACATAGTCAATGAGTTAAGGAAAGAGATGC
CTTCAATGTTTGGTAAAGATTCAAAAAAGAAAGATCTAATCAAGAATCTTGGTCAGGTTT
ATGATAAAATACAAAGAGAGCAGCAAATATCACCGGGAGACTTTCCAGATATTAAAAAAA
TGCAAGAGACCCTGGCCAATCATGACTTCACCAAGTTTCACCCCTTGAAACCCAAGTTGC
TAGAAGTAGTGGACCACATGCTGGCAACGGACATTGCACGGCTCATGGATATGATTCCAC
AGGAGGACATCAACATTGTCAGTGAACCTCTGATAAAGGGTGGTGCTTTCGAAGGTGTAG
AAGACCAGGTCTCACCATTCGGTTACGGTCGGGGCGAGGGCGTGGACGCCGGCCACGGTG
ACCCGGAATGGATCTGCAGCAAGGAGAAACCGAACTACGACCGAATCTTCCAATCTCTGA
ACCCGATCGACGGCAAAGTGACTGGCGCCGCCGCAAAGACAGAGATGGTGAAGTCGAAGC
TGCCCAACTCTGTGCTCGGCAAGATTTGGAAGCTCTCCGACATCGACAAGGACGGCTTCC
TGGACGAAGAGGAGTTTGCGCTCGCGATGCATCTCATCTCGGTGAAGGTGGACGGACACG
ACCTGCCCACCGAGCTGCCCTCGCACCTCGTGCCGCCCTCCAAACGGAACTGAACGCGCT
GCGGTCCGCGGGCCCTCGACCAGCACATTTAGTCTATTTGTAATTTATTGAACTTTGTAA
TAGAGATATATTTGTTTACTGCACTGTTGTTGCTTGTTTTATTTGGCTTCCGACGCCGCG
CGACCACTTTGTTATTGTTCTGAAGTATTCAATTTATGAAACCAATTTTTTTTATATTTT
TATCGTTACATATATCGAAAATAAAATATATTTATTTAGATATAATTTTTATTATAATAA
TTTATAATAAAAGATTTAAATGTCATATGTAGCTGCATCCAATGTTTTAGCTTTATCTAC
TTAACTTTTGTAGAGGTAGGTCTAATTGGTGCGCAGAATGATTGGTTTTCAAAACAATAT
GTATGCGTCGTCCGCGCGCGGGCGGGGTGTGACGCGCCTGCAGACGGACGCTTTCACTTA
TGATTATTTTCTTTACAAAACACTTCAGTGAACCTTCAAATTACATAAAAGTTCATTAAA
AACGGTAAAGGTAATCCTTCCGTGAAGCTACTATATCGAGGGGTGAAACGCTCTGGTTTA
AGCGATATTTATCTTTGTAATTAAAGG
(2307 bp)

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