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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c27033_g1_i1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		splicing_factor_3B_subunit_2_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005684 C U2-type spliceosomal complex
GO:0005686 C U2 snRNP
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016032 P viral process
GO:0044822 F RNA binding
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:7.67 TPM:3.99
ORF EntryO_BomoMSG22009_complete:A_BomoMSG_c27033_g1_i1
Sequence
(Nucleotide)
GTTGACACTTATTGTCAAGCGCGTTAACCTCAAACAAATCAGTTTTGTTTTTTACTGTAA
ATTTATAAATGAATAGATCTTAATAATCACGAACTAAATCATACCTTTGTAGTTAAAAGT
CTATTTTATACAGTGAATTCAGTAGCAGTACTGTGAATTAGCTATGGATGGTCCACCAGG
GACCGGATCTACGAATAACAATGCTTCGGTGGGGCCTCCACCGGGGATGCCAAACTTTCC
TCCGATGCCGCCACCACCGGGATCTATGGGACCGCCACCGGGGTCCATTGGACCGCCACC
AGGAACTATGGGACCACCACCAGGAACTATGGGACCGCCACCAGGAGCTATGGGACCGCC
ACCGGGATCCATGGGGCCTCCACCAATGGGTCCGCCTGGACCACCACCTGTTAGCTCGTC
TGGTGGACCTCCAAACATGCCGCCGGGAATAGGTCCACCTCCACCAGGAATGATGCCTCC
GGGAATGGGACCACCGCCAATGGGGCCGCCTGGAATGGGTCCACCTCCAATGGGCCCCCC
GGGTATGGGACCTCCTGGTATGGGTCCACCCGGTATGGGACCTCCCGGAATGGGTCCTCC
CGGAATGGGACCTCCAGGAATGGGTCCACCCCGAATGCCACCAAATATGATGCGTAATAA
GAATAATTATAATAATCAAAATATGGACATGGGACCACCTGGGATGAGACCACCTATGGG
ACCATGGGATGGACCACCAGGCCCACCTGGTCCACCTGGCCCCCCTGGGCCTGGGTGGGG
AATGCAAAGTGATGGTCCGCCAGGATGGAATGATCAAGATGATGATGATGAAGAAGAAGA
AGAAGAAGATGGGGAAGAAGATTTATCCTCTGACCAACATTCTTCTCTGCCATCACTCTT
GACCATGAAGATTGAAACACCAGAAGAATTTAAAAATAAACAGGGAAATGCTGGAGGTGT
AGTACTCCCAAAGGCTCTGGAAGAAGCTCTTGCTTACAAAGACCAAAGACAAGCAGCTCT
TGGTAGTGAAGAAGATAAAGAAACAGATGTGCAAAAAGACATGGAAGCACCGCCAGCTCC
AGTGATCAGTACGGAGTATGACGTGGAAGAGGATGAACAGTCAGACGATGAAAACATTCC
TGATCCACCGATGCCACCAGTAATTTCCAAACAAGAGTCCCAAGCTAGCAAATCCAATAA
AAACAAAAGAAAGAAAAAGAAAAAGAAGCTGGCTAAACAGAAACGCAATGAAGAGTCTAA
GACAAAGAACAACGCACAAGAAGAAAAGAGATCCAGTGACAAAGAAAATGAAAAAGAAGC
AGATATTGAATACGTGCAAGAAAACATACAGTTTCATGAAATGGAACCAATGTACCGTCA
GTTCCATCGGATACTGGAAGCATTTAAAATTTCGGAGAAAAAGGAAGAGACGATCAAAGA
TGAGGGTATGGATGCTCCAAAACCAACAAAACATCAGGATAAAGTGCAAGACCAGTTCGC
AGCGGATGATGAGGCAGCTGAGAAAAACGCAGCCGACGAAAAGGAGCGCCTATCAAAACG
CAAACTAAAAAAATTGTCGCGTTTGTCAGTGGCCGAACTGAAGCAGCTAGTGGCTCGACC
CGACGTCGTGGAAATGTACGACGTGACCGCGCGGGATCCCAAACTACTTGTCCAGCTAAA
GGCACACAGGAACACTGTCCAAGTACCCAGACATTGGTGTTACAAGAGGAAGTACTTGCA
AGGAAAACGCGGTATAGAAAAACCTCCCTTCGATCTACCGGACTTTATAAAGAAGACAGG
AATCATGGAAATGAGAGCATCGCTGCAGGACAAAGAAGAGACTAAAACCCTTAAAGCGAA
GATGAGGGAACGTTCTAGACCGAAATTGGGCAAGATCGATATTGACTACCAGAAATTGCA
TGATGCCTTTTTCAAATGGCAAACAAAACCGCGTATGACAATCCACGGAGATCTGTACTA
CGAAGGCAAAGAGTTCGAGACTCGTCTGCGCGAGAAGAAGCCCGGAGATCTGTCCGAGGA
ACTGAGAACTGCTCTCGGTATGCCCGTCGGGCCCGGCTCACAGAAGGTACCACCGCCGTG
GTTGATCGCGCAGCAGCGGTACGGGCCGCCGCCCTCGTACCCGAACCTCAAGATCCCCGG
CCTCAACGCGCCCATACCCGAGGGGTGCGCCTTCGGCTACCACGCCGGGGGGTGGGGCAA
ACCGCCCGTCGACGAAATGGGAAAACCGCTCTACGGAGATGTCTTCGGACATCAGACGAG
TGGACAAGATGACGGCGAAGACGTGGACATCGACAGGACAATGTGGGGCGAACTGGAGTC
TGAATCAGAAGAAGAGTCGGAGGAGGAGGAATCGGGCGAGGAGGGCGAGGCAGAGATGGG
CGGGGTCGGCACTCCCGCGGAGGGACTCGCCACGCCGCTCGGACTCAGCTCCGTGCCGCC
CGGACTCGAGACTCCCGACAGCATTGAACTCAGGAAAAAGAAATTGGACTCCGATCTTGA
CGGAGGAGAGACTCCGGCTCTGTACCAAGTACTGCCGGAGCGCCGCGTGGGGGTGACGTC
AGGGATGATGGCGTCCACGCACGTGTACGACATTAACGCAACGAACCCCGTGAAGCGAGC
GGGCGCGACCTCGACGGGTCACGGCCCGGCGGGCGGCGTGGAGGTCACGCTGGACCCCTC
CGAGCTGGAGCTGGAGCCCGAGGCGGTGGCGGCGCGCTACGAGCGCCATCTGCGCGACCA
GCGACCCAACACCCACGAGGACCTCTCCGACATGCTCGCGGACCACGTGGCCAGGCAGAA
GAACAAAAGGAAACGTCAACAGAACACGGACTCAAAACATGCGAAGAAATACAAGGAGTT
CAAGTTCTAGTGATTGTAGACTTATCATTACATTTAGTATTAAGTATTATTGTGAATAAA
GGGAG
(2945 bp)

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