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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c27015_g1_i1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		protein_SMG5_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0031625 F ubiquitin protein ligase binding
GO:0032204 P regulation of telomere maintenance
GO:0035303 P regulation of dephosphorylation
GO:0042162 F telomeric DNA binding
GO:0042826 F histone deacetylase binding
GO:0051721 F protein phosphatase 2A binding
GO:0070182 F DNA polymerase binding
Transcript
Level		FPKM:12.27 TPM:6.38
ORF EntryO_BomoMSG21929_5prime_partial:A_BomoMSG_c27015_g1_i1
Sequence
(Nucleotide)
AGAAAGCACTTATGAAACGTCGTCGCCGTCGACGCATTGCCTCTTCAGAAAGTTCTGACG
TGAGTGATGCTAATACTGAAAGCAGTGATTTAGATGAAATTGAACATTCATACAGCGACT
TGTCAGATTCCTCTGATCAATCTGTATCACTTAGTGAAGCTAGCGATTGTGATGAAGTTA
ACGATGAAACTAAAGATGAAAGTAGTGAACAAATTAATGAAAAAGTAGAACCAAATAAAA
TATTGAATGATGATATCACCTCAAAGATTACAGAAACAAATTCACTTAATTCATCAAATT
TATTGAATTGTAATACAACAAAATCTCAGGAAAACAGCAAAGTAAACACTATAGAATTGA
AAACTTTTTTACAAGGAAACAATTTCATGGCCAGTATCAAGCTGTTGTTGGATTGGATTT
TGATTGAAAAAGATTTAATTCTTTCATGTGGAGACAGCGGAGAGTCCTTGTTTCAATGCG
TTGTAGATTTGTTAAATATTTTTACATTTTATTTCAATACAAAATCTGATGAGGGGACTA
AAGAAGATTGTGAATTAATAAAGTACATTAGAAATTTAGTCATGAAAATGAAACTTGAAT
ACAAGACAATACCCTTACCTGAAGATATAAATTTACGGGGAACAAACATTTGTAAATTTG
ATAAAGATGCTGCTGAATGGCACATCTTAGAAAAGTATAAATTATCTGTTTATGAAGAAA
ACGTAATAAGGATTCTTAACTTCATAGATTTTGGGAACCAGATAGCTAAAATTATACCCA
GAATAAGATTTAACAGGACCATGAAATTGTTTTATCTAAAAAACATTCACCCTCCTAAAT
TGAATACCAAAATTAACCATAAAAGAAGTAGAGAATGGCATTCAAAGAAAAATACTGAAT
CGAATGAAAGTGGATTACTACGGCGCCTTGGTCGACTATGGTTGACATCACAAGTACGCG
AGTTGGAACGCAGCGGACAGTCGGCGGCACCTGCATTACTCGTACTTGACACCGCAGCTC
TTAACAAACACCTCCGTCGTGTCAAACAGCTCCTACTCACAACCAACTTTGTGCTCATGG
TGCCTACAGTTGTGCTACAAGAACTGGACAATTTGAAGCGAGAGCAGAGCACAGCACGTA
AAGCTATCCGTTGGTTGGAACTTCAATTAAAAAATGGCTCAAGATTTCTACGAGCACAAC
GTCCGAACCAGTCAAAGCCCCTGCCGCTCTTGAAATATCCCCGTAAAGCTCCAGCCCATA
TTAATAACTTTATTCAGATTTTAGAGTTCTGCAATCATTTCGTAGCGGAAGATAAAAAGA
CGCAAGGATCCGGTGATGCTGAAAACGTTTTACAAGGGAAGTCTTCGTCCGTCCTTATAC
TACTCGTTGGCAATGCTGATGAAGATGAAGAACAGTATAAAGAATTTAGTGTTATGGGCG
CAGCGCAATCGGCCGGCATTTCCGTAGAAAACATCGTAGATTTCTACAGCAAATGGCGAC
AGACATCGCATAAAAACGGTAAAAAGAGGTGAACGCGTGTCGATCACGAGACCGGTTTTG
ATCACTATGGAAAGAATGGACTTCGAGGATATCGATAAAACGTCAAAAAGCTCTTGCGAG
GTTTTGATAGGACACGTCCAAAACGCTCACTATACACTATACAAAAAAAAAAAAACTAAT
AATGTTTTCATTGAAGGTAGCGCGGAAAATTTTCTATTGATGTATTGTATCAATAATAAA
TTTTTATATATCGGTGTAACATTATATAAC
(1770 bp)

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