SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c27004_g1_i2
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		2',5'-phosphodiesterase_12_isoform_X1_[Bombyx_mori]
Ontology
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006397 P mRNA processing
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
Transcript
Level		FPKM:5.62 TPM:2.93
ORF EntryO_BomoMSG21892_internal:A_BomoMSG_c27004_g1_i2
Sequence
(Nucleotide)
TGCTCTTCCGATCTCTTGATTTTGTGCGGCGATTATAACAGTGTACCAACTTGCGGAATA
TACCAATTGTATACAACAGGAATAGCACCAAGTACATTGCCAGATTGGAAATCCAATGAG
ACCGAAAGTGTACAAGGTTTGAATCTGGAGCAGGATATCTTACTGGCCAGTGCATGTGGT
ACACCAACATACACAAATTTTACTGCTGAATTTGCTGATTGTTTGGATTATATATTTTAC
GACACATCCAGTTTAGAGGTTGAACAGGTAATTCCGTTCCCGAGTATAGATGAGTTAAAA
GCCAACGTTGCCTTACCAAGTGTTGTTTTTCCATCGGACAGATCGGAAGAGCGTC
(355 bp)

- SilkBase 1999-2023 -