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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26996_g1_i2
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		polynucleotide_5'-hydroxyl-kinase_NOL9_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000448 P cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0051731 F polynucleotide 5'-hydroxyl-kinase activity
Transcript
Level		FPKM:1.26 TPM:0.66
ORF EntryO_BomoMSG21851_5prime_partial:A_BomoMSG_c26996_g1_i2
Sequence
(Nucleotide)
AGATCGGAAGAGCGGTCTTGGACCCCTGAAAGACCTCAAAATGGATTTTGTAGAAAATAA
TTTTAGTATATGCGAACTGTTTACGAAAACAAAAAATGTTCAATCATGTTTTCATAGAGC
ATCAGACATTTTAGGTTGTTCGTTGTATTTAAAAAGACCCTTGAGGACATACGAAGAAAG
ACCACAGTGGGAACAGGCATATACATACGGGACAGATCCAGGAGCTAGAGGTATTATATG
TGGTGGGAAGGGGACTGGGAAGTCAACTATGCTCAGATACCTATGCAATAGATTGCTGGA
TCATGGACCGGTGCTAGTCATAGATTTAGACCCGGGCCAGGCAGAGTTCACAGTTGCAGG
AAATTTATCTGTAACAATTGTCAATGAACCATTACTCGGACCTAATTTCACTCATTTGAA
GACACCTGAGAAGATGCTAAACATTGGCATGATTAGCCCTATGGATAACCCAACCAGATA
CGCTTCGGCTGTCCAAGAGATTATTGCTTATTGCCACCAAACCCACAAGTACAGATCAAT
GCCGTGGGTCATCAACACAATGGGAATGACCAACAATTTAGGACTTAAATTTATGTTATT
GACTATTTTGGCAGCGAAACCGACATTTTTATGTCAGATATATTGTAAATCCTATAAAAA
ACAGTTTGAATGCCCATTACAATCAAACTCTGTAAGAAGATTGTGTGAATTTTATAAAAA
TGATAGACTGCTCAAGAATACGATTTGTCCCGAGTATTTTGATTACAATTTTATGACATT
CATTACCGTAAATGAATCTAGTAATCAACCAAAAAGGGCCATACCACTAATGCCTAGAGA
TGAAAGATATTTAAATTATTTGGCATATTTTGGAGAGTTATTGAACATGCACCAAGGAAC
AAATATTTTAGGAATTGTGCCATATTCAGTGGAATTGAAAAATTTATGTATAGGTCTGAA
CGTGAGAGTACCCGAGGATACAGTCACCAAGGTGATCAATGGCAAAATAGTAGCGCTTTG
TAAACTGACAACCGTTGATAAGGGCAAAATGTTTACACTGGGAGATAAAGCAATACCATG
TCTTGGAAACGGTCTGGTGCGCTGCGTGGATTTCGAGAAACAAGTATTGTACATCATCAC
TCCATTGCCTGTTGGAATACTCTCCCAAGTTAACACATTGGTGTATTCGGATTGGGCTCC
AGAGATAGTAGGGCAAGAGAAATACTTGCCAGACAACATAATTGTCCCTTACCGCATTAC
ATCCCAGCAGAAACAGAAACAGCTCATGATAACACCACGCCAGATCGGAAG
(1311 bp)

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