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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26978_g1_i2
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_low-density_lipoprotein_receptor-related_protein_2_[Papilio_xuthus]
Ontology
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005905 C clathrin-coated pit
GO:0006766 P vitamin metabolic process
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007568 P aging
GO:0010165 P response to X-ray
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016197 P endosomal transport
GO:0016324 C apical plasma membrane
GO:0017124 F SH3 domain binding
GO:0020028 P endocytic hemoglobin import into cell
GO:0030165 F PDZ domain binding
GO:0030492 F hemoglobin binding
GO:0031100 P animal organ regeneration
GO:0031526 C brush border membrane
GO:0032403 F protein-containing complex binding
GO:0032526 P response to retinoic acid
GO:0033280 P response to vitamin D
GO:0042493 P response to xenobiotic stimulus
GO:0042562 F hormone binding
GO:0042953 P lipoprotein transport
GO:0042954 F obsolete lipoprotein transporter activity
GO:0043234 C protein-containing complex
GO:0045056 P transcytosis
GO:0045121 C membrane raft
GO:0046872 F metal ion binding
GO:0046879 P hormone secretion
GO:0050750 F low-density lipoprotein particle receptor binding
Transcript
Level		FPKM:20.66 TPM:10.75
ORF EntryO_BomoMSG21740_complete:A_BomoMSG_c26978_g1_i2
Sequence
(Nucleotide)
TGACAACTCTGACGAGGATCCACTCCACTGCGCGCAAAGAACTTGTCCGTCCAACAGCTT
CCGCTGTCCGAACCATCGGTGCATCCCTGCTACTTGGTACTGCGACGGTGATGACGATTG
TGGTGACGGTGCCGATGAACCACCCGAGTACTGCCGCTCGGAAGGCCGGACCTGCTTCGG
GGACCTTTTCACCTGTGACAATGGAAACTGCATTCCCCGGATCTACATCTGTGACGGTGA
CAACGATTGCCTTGACAACAGTGACGAAGACGACCGCCATCAGTGCAACGAACGTAAGTG
CGATGCGGAAACCGAGTACACCTGCGAAGAGAACAAGGCCTGGGGAAGGGCGCAGTGTAT
ACCCAAGAAGTGGCTGTGTGATGGTGATCCGGACTGTATTGATGGCGCTGATGAAAACTC
TACCATCCACCACTGCTCCACTCCAACGCCGTGCACCGACGATCAATTCCAGTGCAACAA
CGGCCGCTGTATCAACCGAGGCTGGGTCTGCGATCACGACAATGACTGCGGAGATGGCTC
CGATGAAGGAAAACATTGCAATACGCAATACAAACAGTGTACGGACCAGGAATTCAAGTG
TCAAAATTTTAAATGCGTTAGGAACCACTTCAGATGCGATGGCGAAGACGACTGCGGTGA
TCACTCAGACGAGGTCGGCTGCGTCAAACAAAATAAAACGTGTCCGACAGGACAGTTCAA
GTGTAACAACGACCAGTGCATCGATTACAGCCTCGTTTGCAATAAGGTGTCAGACTGCAG
CGATGACTCCGACGAGCCGGCCCACTGCAACGTCGACGAGTGTGCTAAGCTGGAGATTAA
CCAGTGCGGGCATAAGTGCATCGACACTCTCACCAGCTACTACTGCGACTGCAACCAGGG
CTACAAACTCCTCACTGACGGCAAAGCATGTGCAGATATCGACGAGTGTATAGAGACTCC
AGGCGTCTGCTCCCAGTACTGCTCTAACACTCCTGGCTCTTATTATTGCAAGTGTAATGA
TCAATACTATGAGAGAGAGGCTGACGAACACACCTGCAAGAGAAGAGATAAGATACCGCC
ATGGGTCATATTCACAAATAAGTACTACGTGAGAAACATGTCTACGGACGCATCTCTGTA
CAATCTGGTTCATCAGGACCTAATGAACGTTGTCGCCATAGACTTCGATATAAAAGAAGA
ACAGATGTACTTTGCTGACGTTTCCGCCAAGACCATATACAGATCTAACTACACCGACCC
CAATCCCACAAAGGAAGTCGTGATTAGGCATGACTCTCATGGACTGGAAGGTATCGCGGT
TGATTGGATCGGAAGAAAGTTGTACTGGCTTGACAGACACTCTAAGAACTTGGACGTCTC
CGAATTAGACGGAACGAGACGGAAGACGCTTAAAACCGGAATCGCCGATCCCAGAGCTAT
AGTTGTCCATCCAGGAACTGGCTATCTATACTTTACGTCTTGGCATCTGCAAGCGTACAT
TGGAAAGATGGGCATGGACGGATCAAACTTCACTATGATTTTGAACTGGGACGACGACAT
CGCCTGGCCTAATGCGCTGACCATCGATTACTTCACAGACAGGATTTATTGGGCCGACGC
TCACTTGGACTATATCGGGTCAGCCGATTTAGAGGGTAGACACAGACACGTGGTGCTCTC
TGGAAAGTCCGTACCTCATGTTTTTGCTCTCAGCTTGTTCGATGACGATATTTATTGGAC
TGACTGGAATTTGAAAGCTATAAGAAAAGCTAACAAGCATTCCGGCGAGAACTTGACGGT
TTTAAGAAATACCACCCACAGACCATACGATATCCACGTAGTGCACCCTCTGCGACAACT
GCCTTATCCTAATCCTTGCGGCGATAACAATGGAGGCTGCTCTCATCTCTGTCTGATCGC
TCCTCCGCACGAGTCGAGTTATCTAAATATTGAAGGTTATGGCGAGGAAGGTGCCACCAC
ATACAAATGCGACTGTCCGAATCAGTTCTACTTAGCTAGAGACATGAAGACTTGCATAGT
CAATTGCACCGATGGACAACACAGGTGTAACGGTCGCGACGAAAAATGTATCCCATGGTT
CTGGAAATGTGATGGAGAAAAAGATTGCAAAGACGGTTCCGACGAACCCGACACCTGCCC
GGTGAGACACTGCAGAGCTGGCTCCTTCCAGTGCAAGAATACTAACTGTACCCCTGCGGC
CACTATTTGTGACGGGACGGACGACTGCGGTGACGGCAGCGACGAAGCAGAATGCGCACA
CAATTGTCCGTCTCTCGAGTTTAAGTGCAAACATAGTGGCAGGTGCATATTGGACAGTTG
GAAGTGTGACGGAGACACCGACTGCAAGGATAACAGTGACGAGGACCCGGCGATGTGTCA
CAATAGAACTTGTAATCCCGACACTGAATTTTCGTGCAAGAATGGTCGCTGCATTCCGAA
ACTGTGGATGTGCGACTTCGATAACGACTGCGGCGACGACTCCGATGAGCCCGCCTACAT
GTGCCGACAGAAGAACTGCACCACCGGATGGCGCCGGTGTCCCGGACAGTCCAACTACAG
GTGTATTCCTAAGTGGTTGTTCTGCGATGGAAAAGACGATTGCAGAGATGGTTCAGACGA
ACTAGCCGAAAACTGTCCAACTTGCGCTGCCGAGACTGACTTTACGTGCGACAACAAAAG
ATGCATACCGAAACAATGGCTCTGTGACTTTACCGACGACTGCGGCGACGGCAGCGATGA
AACCGAAGCTCTCTGTCAGAGCAAATACAGAGAGTGCTCCGAGTCCGAGTTCAAGTGTGG
CAGTGGCAAGTGCATATCCTCGAGATGGAGATGCGACCACGAGGACGACTGCGGCGATAA
CTCGGACGAGACGGACTGCGGGGGCTTCCAGTGCAAGAACGGAACGTTCCAGTGCCGCTC
CGGCCATTGCATCGCGGCGCACTTCCGCTGCGACGGCGACCGAGACTGTCGGGACCTCTC
CGACGAGATTGGCTGTCCACCTAAGTTTCCCGGCGGCAGATATTGTCCCGAAAATAAATT
CCAATGCGGCAATACCCTGTGCGTGTCGCAGTCGGACCTGTGCGACGGCACGGACGACTG
CGGGGACGGCTCGGACGAGACGCCCGACATCTGCAACAACTTCAACTGCGACACCCTTCG
CCGCTTCCACTGCGACAACCACCGCTGCGTACCCAGGTACCAGGTGTGCGACGGCGTGGA
CAACTGCGGCGACGGCTCGGACGAGAACAACATGACGCTGTGCGCCAGCCGCGCGCGCCC
CTGCGAGCCGCTCACGCAGTTCCAGTGCGCCAACAAGCAGTGCGTGGAGCGGCGCCGCCT
GTGCGACCTGGGCGACGACTGCGGGGACGGCTCCGACGAGCTGGGCTGCCATCACGAGCG
CTCCTGCTCACATCTAGATAAAGGTGGGTGCGAGCAGTTCTGCACGAACTTGACGTCCAG
CAACGGCGGGTACATCTGTACGTGCTTCCAGGGCTGGATCATTTCGTCCGCCGACCCCAA
GCGCTGCGTGGATCTGGACGAGTGCTCTGCTGGCCTCCACCACTGCTCCCATCTCTGTAC
CAACCTCAACGGAAGTTTTAGCTGTTCTTGTCGAGAAGGGTTCCAACTCGCCGACAGTCT
GTCTGGAGTGTGCAAGGCGACGAAGGATGACGTCGTCCTGTTATACTCGAACGGCCCAGA
GATCCGAGCCTTTGCACAGAGCAAGAATGAGCAGTTCGACGTGATCACCTCCGAGAAGAG
GATCGAAGCCATCGACTACGACCCGGTTAACGAAATGATATTTTGGGCGGACAGCTACGA
CAAGACGATCAAGCGATCCTACATGGTGAACGCGATGAACGGCGCCGTCAAAATTGGATT
CGCGCAGGATTTGAACATGAAGGGTAACTCTAAGCCGACCGCCCTCGCCGTGGACTACGT
GGGAGACAACCTCTACTGGACGGAGGTGGAGCGACTCGGGTCCAAGCCCCGAGGTCGCGT
GCTGGTGGCGCGGACGGACGGGCGGTACCGCCGCGTGCTGGTGGCCGCAGGGCTGGAGTC
CCCCACGGCGCTGGCGCTCGACGCGAGAGCCGGACGCATCCTGTGGGCAGACGCCGGTAC
CGCACCCAAAATAGAGATCGCCTGGATGGACGGCTCCAAGCGGCGGCCGCTCGTCACCGA
GAACATCCGCCATCCCACAGGCCTCGTCATCGACCACGCCATGGATCGCGCTGTCTACTG
GGCAGACACTAAGCTGAACACTATTGAGATGATGCGTCACGACGGCTCCCAGCGTCGGGT
CATCCTCAAGGGAGATCTGCTGCGGCATCCGCTATCACTGGACGTGTTCGAGTCCTCGTT
GTATTGGGTCACCAGGGACACCGGGGAGCTGCTGCGACAGGATAAGTTTGGTCGAGGCGT
CGCTTTTGTTATATCTCGAGATCTCGTGAACCCGTCTGGAGTCAAAGTATACCACCCCCT
CCGGTACAACGTGTCGGCGCTGACGGCGTGCTCGCGCGCGGCGTGCTCGCACCTGTGCCT
CGTGGTGCCGGGCGGGCGCCGCTGCACGTGCCCCGACCAGCAGCCGCCGCCCAAGCGGGC
CACGCAGGAGCTGGCCTGCGACGCACCGATAGAAGTCCCCCGTCCTTTACCCCGCATCTG
CGAGTGCGAGAACGGTGGAACGTGCGTGGAGCGCGCCGACGGAGGCCTGGAGTGCCGCTG
CGGAGAGGCGGGGGCGGGCCCGCAGTGCGCGTCCCCCGCCGCCGTGCGGGCCGGCGCAGG
GACCGGCGCGGCCGTGCTGGTGCCGGTGCTGCTGGTGCTGCTGCTCGGAGTTGCTGCCGG
AGCCGCCTGGTTCGTCATCAGGAAAAGGCCGTTTGGTAAAGGCGGCCTGAGCAGTCTAGC
GTCATCCCAGAGCGTCTCGTTCCGTCAGGGCTCCAACGTGGAGTTCGGTGGCGTATCAGA
ACCCGCCTACACGCTCGAGGAAACAGCGGCTGCAGCAGCCGCCGCCGCGGCCGCTAGAAA
GGGGAGAGATTTCTCCAACCCTATGTATGATGCGGTCACGCGGGCTGTTGCCGCGGGTGA
GCCTGAACCGCCGTTACCTGGCATTTACGAAGTACCAGACGAGTTAAAAGATAAGGTAGC
ATCCGCTGTGATCTCCCCTTCATCAAGTGAGACGCGTCATGCCGCAGCGTTAGGCGCCGG
CGCGGTGCGGGCTCTGGAGCCAGCCGCTGACACCGGCGCCGACACGCAGGGCCTTGTGCG
CGAGGACAAGCATTGCTAGCACGCAGCCCCGCGCAGACCCGGGCGACGGGTCGCGCCGCT
CCTGCTCACGCCGAGAGCATTCTTCTACAAACATAAATCGTCCGACCACAGGAATAATGT
AAAGCTCTACTCTGTACTTCAACATCACTAGAGCAATTTGGAAGAGAGTGTCATAATTAA
TGACAATGACGAAGACAACTTCAATGTCAACGTCAGTCGCCTCGATGAGGCCAAATAAAG
ACTTTGAAGTATGTCAGATTTCAAATCATTTCAACAAATCGAAGATGCAATTTGTAATTT
AATGTGACATTAAAATGTTAATTAAAAAGAATACGTACATACAGTTATTTGTTAAAGTTT
GCGTGTAAGTAAAAATAAACAAAATGGATCTTTAAAAAATTGATGTTATCATTATTATTT
TATATCTACAAAATGTGAATTATAAGACACGAAAATTAATTTCGTTTGGTTTTTCCAATG
TCTTTCCG
(5768 bp)

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