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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26956_g1_i2
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		alkylated_DNA_repair_protein_alkB_homolog_8_[Bombyx_mori]
Ontology
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0002098 P tRNA wobble uridine modification
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0005506 F iron ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016300 F tRNA (uracil) methyltransferase activity
GO:0016491 F oxidoreductase activity
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:2.36 TPM:1.23
ORF EntryO_BomoMSG21618_complete:A_BomoMSG_c26956_g1_i2
Sequence
(Nucleotide)
GCAAACGTGAACATTTGTTTCTGTATCAGATTCTGTATTTTTTACTTGTGACAGTGCTCC
CTTAGTTAGACTAAGCTTTAAATATATTTGTAATTAGTGTTGATACAACATGGAAGACGA
TAGAAAACATGAGAAGAAACGCAAACGGTTTGCTGCCCGATTGAATACTCTGAAAGGAAT
TGTTTGTTATGAAGATCCTAGGCCCAATGTGATTCTTTGCAATGTGGGGCAAGCTACAGG
ATTTGATAAGCAAAAACTGTTGAAACTGCTCACAGAGTACAAGGAAAAAATACCAAAGAT
TTGTAAATTGCTGTGGAGAAGGCTCCAACACTATGGTTACGATCTCGGAGTACCAGTTCA
GCTGACTGTTAACAAGTACTTACCTGGGCAAGGTATCCCGTCGCATGTCGACAAACACAG
TCCATTTGGAGAAACAATTCTGGCCCTATCACTGGGCTCCAATGTGGTTATGGATTGGAA
GCATCACACAGGGAAATATGTGCCAGTTATGGTTGAGGCTAGATCAATGATGATAATGCA
AGATGAAGCTAGATATGACTGGCAGCATGGAATACAGCCAAGAATGTGGGACCCAGTCCT
TGATGTTCGTTTAATAGATAATGAGAAAGTTAAAGTGATCACATCTGATACTGTACAGAG
GGAGATGAGAATCTCCTTGACATTCCGATGGACCAGATGCGGGCCATGTAAATGTGAATA
CAAGATGTTGTGTGATAGCATTGAACGTAATATTCCTGAGACAATTAGCAATGATGTTGC
ATCTAACATAGAGGACATACATGTGCACCAGGTATACGAACAAATCGCAGGACACTTCAG
CACAACGCGGCACAAGCCTTGGCCCAAAGTTGTAGACTTCATGCAGCACGTGCCGGCTGG
ATCTATAGTGCTGGACCTTGGCTGTGGCAATGGCAAGAATATACTCAACAGAACAGATAT
ATTGCAGGTAGCCGGTGAAAGGAGCAGCGGTCTACTAGAGGAATGCAAGGGGCTCACGGC
CCGGATATCCGGCGCCGACTGCATCCGGTTGGACTTGCTCAACACCGGCCTCAAGGACGA
GTGCGCTGATTTCATCATTTGCGTAGCCGTCGTGCACCACTTCAGCACACAGGCACGGCG
CCTCCACTCGCTACAAACAATACACCGACTCCTGCGGACCAACGGGCAAGCGCTCATCAC
GGTGTGGGCCAAGGATCAAACCAAGTCGAGCTACCTGTCCCGGACCCGGGCGCCGCTGCT
GGACCGGCACAAACTGACGGTGGGCGGCATCCACTTGCCCGTGCACGAGAACCGCACGCA
GTTCCAGCACAAGGATCTGCTGGTGCCCTGGAACCTGCGCAGCAAGGCGCCCCCGCTCCA
ACAGCCCGACACCACCTTTCTCAGATACTACCACGTCTTCGATGAAGGGGAACTGGATCA
GCTCTGCCGAGACGCGCGGCTCGCGATCGTCAGGAGCTTCTACGAGGAAGGCAATTGGTG
TGTCGTCTGTATGAAAGTGTAATAGGGAAAGTTGAAAGTTAAATATGGATATCGTCTCAG
CATTTTTGTCTAAAGGCAAGACGTCATGTGTGTTGGCATCGTTGGCCGCAAGTGCCTCTC
GAGTGAAAAGTGGCACGCTGCATGCTGGCTGTATGCCACTGATTCCCTGGCTCATTTCGA
AATGAAGTGTAAAATATTGAAATTGATGATGTCACAGATGACAGTTGTTTGTGTTGCAAC
AATGCAAGTATGAAATGTGTGCGAGGAAGCCAATGTGTGATGGTCAAATATCAGATCAGA
TTTACTTTTTCCAACACAAAAATGATTTAAACAAATTGGTGTGTAGTTTTTTTATTTATT
TTCGATCTCAGTCGAGTTCTCTACATACAATACGTTTTTAAATGAGTTGTTTAAAGTTTT
TTTTGTCCTATAATTATTCACTGGATGAGAAATTCTGCCAAAAATTATAGTTATTTATAT
GAATGTATATTGTCGTAAACTTCGAGAATGTAATTATATTGTGACATCCGGAGTGAAGTT
AGCATTCAATTGTAACGTGAATTTTACAAGTATGTAGTTAGCGGTCAAAGTAAAGTAAAT
GACAAATTAAGGTAATGCTGCTACACATTCTACATGTTCAAAGTCCATGTGCTTGAATGT
TTGAATTTTTTAATTGTCTTAAACTTTTGTATAC
(2194 bp)

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