SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26956_g1_i1
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		alkylated_DNA_repair_protein_alkB_homolog_8_[Bombyx_mori]
Ontology
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0002098 P tRNA wobble uridine modification
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0005506 F iron ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016300 F tRNA (uracil) methyltransferase activity
GO:0016491 F oxidoreductase activity
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:5.09 TPM:2.65
ORF EntryO_BomoMSG21615_complete:A_BomoMSG_c26956_g1_i1
Sequence
(Nucleotide)
GCAAACGTGAACATTTGTTTCTGTATCAGATTCTGTATTTTTTACTTGTGACAGTGCTCC
CTTAGTTAGACTAAGCTTTAAATATATTTGTAATTAGTGTTGATACAACATGGAAGACGA
TAGAAAACATGAGAAGAAACGCAAACGGTTTGCTGCCCGATTGAATACTCTGAAAGGAAT
TGTTTGTTATGAAGATCCTAGGCCCAATGTGATTCTTTGCAATGTGGGGCAAGCTACAGG
ATTTGATAAGCAAAAACTGTTGAAACTGCTCACAGAGTACAAGGTAAACACACCATTGCC
TAAGTTTGTTGCCGAGAAAGGAGAATCCTACTCATATCTCATGTTTGATAAAGCCGAGAA
TGCATCACTATTTTATGAGGCATGCAATGGGAAAGCACAGGTAGATGAGAATGGAACAAC
ACTCTATGTGACATTTGTTGAAAATGTTCCGGATACTGATATTATTTGTAAGCATCCAAA
TCCTAAAGGCTTACATATAATACCCGATTTTCTTACCGAAGATGAAGAGAAGTTATTCCT
TAATACCTTTAACATACAACACGTAGAAACAACATTAAAGAACCGTCAAGTCAAACATTA
TGGTTATGAGTTCAGATATGGCAGCAATGACGTTGACTTGAGTTGCCCATTGCAGGAAAA
AATACCAAAGATTTGTAAATTGCTGTGGAGAAGGCTCCAACACTATGGTTACGATCTCGG
AGTACCAGTTCAGCTGACTGTTAACAAGTACTTACCTGGGCAAGGTATCCCGTCGCATGT
CGACAAACACAGTCCATTTGGAGAAACAATTCTGGCCCTATCACTGGGCTCCAATGTGGT
TATGGATTGGAAGCATCACACAGGGAAATATGTGCCAGTTATGGTTGAGGCTAGATCAAT
GATGATAATGCAAGATGAAGCTAGATATGACTGGCAGCATGGAATACAGCCAAGAATGTG
GGACCCAGTCCTTGATGTTCGTTTAATAGATAATGAGAAAGTTAAAGTGATCACATCTGA
TACTGTACAGAGGGAGATGAGAATCTCCTTGACATTCCGATGGACCAGATGCGGGCCATG
TAAATGTGAATACAAGATGTTGTGTGATAGCATTGAACGTAATATTCCTGAGACAATTAG
CAATGATGTTGCATCTAACATAGAGGACATACATGTGCACCAGGTATACGAACAAATCGC
AGGACACTTCAGCACAACGCGGCACAAGCCTTGGCCCAAAGTTGTAGACTTCATGCAGCA
CGTGCCGGCTGGATCTATAGTGCTGGACCTTGGCTGTGGCAATGGCAAGAATATACTCAA
CAGAACAGATATATTGCAGGTAGCCGGTGAAAGGAGCAGCGGTCTACTAGAGGAATGCAA
GGGGCTCACGGCCCGGATATCCGGCGCCGACTGCATCCGGTTGGACTTGCTCAACACCGG
CCTCAAGGACGAGTGCGCTGATTTCATCATTTGCGTAGCCGTCGTGCACCACTTCAGCAC
ACAGGCACGGCGCCTCCACTCGCTACAAACAATACACCGACTCCTGCGGACCAACGGGCA
AGCGCTCATCACGGTGTGGGCCAAGGATCAAACCAAGTCGAGCTACCTGTCCCGGACCCG
GGCGCCGCTGCTGGACCGGCACAAACTGACGGTGGGCGGCATCCACTTGCCCGTGCACGA
GAACCGCACGCAGTTCCAGCACAAGGATCTGCTGGTGCCCTGGAACCTGCGCAGCAAGGC
GCCCCCGCTCCAACAGCCCGACACCACCTTTCTCAGATACTACCACGTCTTCGATGAAGG
GGAACTGGATCAGCTCTGCCGAGACGCGCGGCTCGCGATCGTCAGGAGCTTCTACGAGGA
AGGCAATTGGTGTGTCGTCTGTATGAAAGTGTAATAGGGAAAGTTGAAAGTTAAATATGG
ATATCGTCTCAGCATTTTTGTCTAAAGGCAAGACGTCATGTGTGTTGGCATCGTTGGCCG
CAAGTGCCTCTCGAGTGAAAAGTGGCACGCTGCATGCTGGCTGTATGCCACTGATTCCCT
GGCTCATTTCGAAATGAAGTGTAAAATATTGAAATTGATGATGTCACAGATGACAGTTGT
TTGTGTTGCAACAATGCAAGTATGAAATGTGTGCGAGGAAGCCAATGTGTGATGGTCAAA
TATCAGATCAGATTTACTTTTTCCAACACAAAAATGATTTAAACAAATTGGTGTGTAGTT
TTTTTATTTATTTTCGATCTCAGTCGAGTTCTCTACATACAATACGTTTTTAAATGAGTT
GTTTAAAGTTTTTTTTGTCCTATAATTATTCACTGGATGAGAAATTCTGCCAAAAATTAT
AGTTATTTATATGAATGTATATTGTCGTAAACTTCGAGAATGTAATTATATTGTGACATC
CGGAGTGAAGTTAGCATTCAATTGTAACGTGAATTTTACAAGTATGTAGTTAGCGGTCAA
AGTAAAGTAAATGACAAATTAAGGTAATGCTGCTACACATTCTACATGTTCAAAGTCCAT
GTGCTTGAATGTTTGAATTTTTTAATTGTCTTAAACTTTTGTATAC
(2566 bp)

- SilkBase 1999-2023 -