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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26918_g1_i2
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		U4/U6_small_nuclear_ribonucleoprotein_Prp31_[Bombyx_mori]
Ontology
GO:0000244 P spliceosomal tri-snRNP complex assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005687 C U4 snRNP
GO:0005690 C U4atac snRNP
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0060041 P retina development in camera-type eye
GO:0071011 C precatalytic spliceosome
GO:0071339 C MLL1 complex
GO:0097526 C spliceosomal tri-snRNP complex
Transcript
Level		FPKM:10.83 TPM:5.64
ORF EntryO_BomoMSG21450_5prime_partial:A_BomoMSG_c26918_g1_i2
Sequence
(Nucleotide)
GCTCTTCCGATCTGTTCCATATCCCGTCTTACCTAAAGAAGAAGAAATCAAGAATGTCTC
GATAAGAGAACTCGCGAAACTAAGATATTCTGATCGTCTGAAACGTGTTATGAGTGAAAT
AGAATGTAATGCTGGAAATAACAGAAATAAGGTTGAAGTTGCTGGCTTAATGGAGTCTGA
CCCTGAGTATCAACTGATTGTGGAAGCAAATAATGTTGCTGTTGAAATTGATGGTGAAAT
AGCTATTATTCACAGATTTGTCCGTGACAAATATCAGAAACGGTTTCCTGAATTGGAATC
TCTAATCATCACTCCATTGGAATACATAAGGACAGTGAAAGAACTTGGCAATGATTTGGA
CAGGGCTAAGAATAATGAAATATTACAGAGTTTTCTTACTCAGGCCACTATTATGATTGT
TTCTGTTACTGCATCTACAACTCAAGGGAAATTACTAAGCCAAATTGAACTAGAAGAAAT
CAATGAGGCCTGTGATATGGCAAGTGAGCTGAACAATTTCAAATCGCAAATATATGAGTA
TGTTGAAAGTAGAATGACTTTTATTGCACCAAACATAACTGCCATTGTTGGAGCATCAAC
AGCAGCAAAAATCCTTGGTGTGGCCGGTGGATTGTCTAAATTATCAAAGATGCCAGCGTG
TAATGTGTTACCTCTCGGGCAACAGAAGAAGACACTGTCAGGCTTCTCGCAAGCAACAGC
TCTACCTCATACTGGGTTCATTTATTTTTCACAAATTGTACAAGATACAACACCTGAATT
AAGGTACAAAGCTGCGAAATTAGTGTCGACTAAGTTAACATTAGCCGCCCGTGTGGACGC
GTGCCACGAGAGCACCGATGGGCACATCGGTCGGCAACTACGGGAAAATATCGAAAAGAA
ACTAGATAAACTACAGGAACCCCCACCGGTGAAGTTCGTGAAACCCCTACCGAAGCCGAT
CGAACAAAGCAGGAAGAAGAGAGGCGGCAAACGTGTCAGGAAGATGAAGGAGCGTTACGC
TATGACCGAGTTCAGGAAGAACGCCAACCGACTAAACTTTGCTGACATCGAAGATGACGC
GTACCAAGAAGATTTAGGATACACGCGAGGCACGATCGGCAAGTCTAGCACGGGCCGAAT
CCGACTACCGCAAATCGACGAGAAAACGAAGGTCCGCATCAGCAAGACATTGCAAAAGAA
CTTACAGAAACAACAGCAGTACGGCGGTGCTACCAGTATTAGAAGACAAGTATCTGGTAC
TGCGTCTTCTGTGGCCTTCACGCCTCTACAGGGTTTGGAAATCGTCAATCCTCAAGCCGC
AGAAACTAGGACCAACGAAGGCAATGCCAAGTATTTCTCTAATACATCCGGGTTCTTATC
TGTGGGAAAGAAATCTGATTAAATTAAATATTTTGCGTTTTTTTTTTCCACTTTTTTTCC
TTCCGCTGAAACTCTCCTGATACGGCG
(1467 bp)

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