SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26915_g1_i4
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		DNA_ligase_1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
Transcript
Level		FPKM:4.90 TPM:2.55
ORF EntryO_BomoMSG21446_complete:A_BomoMSG_c26915_g1_i4
Sequence
(Nucleotide)
TACCTTCGCAATCGTCGGCGCAACCAAATATATTAAGTATATAATCTATGGGTTAACATG
TAAAATCAGGTTTTTTTGAAAACCAGAACATAATATTATAGTGATTGGAATCAATTTTTT
CTGGAACCAGTAAACAATAACTAGCTGTATGGTGTCGTCAAGTGACCGGGTTCATACTGT
GATTACCGTGATTTGAAACCAGTCACAACATGGCTCAAAGGAGTATCACGTCATTCTTCA
AGAAAACTCCATTTACACCTATGGAAATAAAAAGTAATGGTGGATCCAAAGTAAGCCATG
TAAATGGGGACACATCACCCATATCCGACGAAAAAGACAAGCCTTCTGAAAGACAACAAT
CCAACAGCATAGATAATGACGGTGACTCCCAAGATTCTTTGAAACCGAAAAATAAAGCTA
AACGACAACGTGTGATAAGCTCTAGTAGTGAATCAGAATCTCCAGTTAAAGTGAAAAAGG
AAGACCTTTCAGACAATGATGACTCTATAACTTTAAACAAGAGCGTAAACAAAACTTATG
ACTCACCAAAAAATAAAAAAGCTAAAATAAAAAAAGAAATCAAAAGCCCATCACCTAAAA
AGGGTGCAAAGAGTTTGTCTCGTGATGAGGTAAAAGAAAACAGCTTAAAATTGAAGATTG
TTGGATCAAAGGAAAAAGACAATATTGTGAAAAATACCGAGCATATTGATAATATTGAAA
ATGAGAGTGAAGAAATACAGAAAGTAGCAGAAAATGCATACAATCCATCAAAATCAAAAT
ACCACCCTATAAAAGATGCTTGCTGGTCTAAAGGCGACCCAGTGCCGTATCTTGCATTAG
CTAAGACTTTGGATCTTATAGAAGGAACATCAGCTCGACTGAAGATAATAGAAATATTAA
GTAATTTTTATAGGTCTGTAATGGTGTTGACTTCAGAAGACTTGTTGCCTTGTATTTACT
TGTGCTTAAATCAACTAGCACCAGCATACCACAGTTTGGAGCTTGGCATAGCAGAAACGT
ACCTAATGAAAGCCATAGGCCAGTGTACAGGCCGTACCCTAGCACAAGTGAAGTCTGCAG
TACAGAAGTGTGGGGATATGGGAAGAGTGGCAGAACAGGCTCGAGCCGCACAAAAGACAA
TGTTTGCGGCCCCTAAACTTCAGATAAGAAAGGTTTTTGCTGCACTAAAAGAAATTGCTC
ACATGACTGGTCAAGCATCAGTGAATAAGAAAATAAATAAAATCCAGTCCTTGTATGTCG
CCTGCAGAGATTGTGAAGCACGATTCCTAATAAGGTCCCTGGAGGGGAAGCTGCGCATCG
GCCTGGCGGAGCAGTCGGTGCTGCACGCGCTGGCGCTGGCCGTCGCCACCACGCCGCCCG
GACCCAACCTGCAGCTCGACGCGGCGCAGCACATGTCCGCCGACAAGTTCAAGGCGCTGG
TGGAGCAGCACGTGGCGGTGGTGCGGCGCACGTACTGCGAGTGTCCCGACTGGGCCGAGC
TGCTGCACGAGCTGCTGCGCGGCGGCGTGGCGGCGCTGGCCTCCCGCTGCAGCATGCGCG
TCGGCGTGCCGCTGCGCCCCATGCTCGCGCACCCCACCCGCGCCGTGCGCGACGTGCTCG
CCAGGTTTGAGAATGAAGAGTTCACCTGCGAGTACAAGTACGACGGCGAGCGTGCCCAGA
TCCACGTGCCCGCCGCGCCCGACGACAAGCCGGACTTCGCCAACGCTGCCATATTCAGCA
GGAACCAAGAAAATAATACCGCCAAGTACCCGGACGTGCTGAGTCGCCTGCCCACGCTGC
TCAAGGAGGGCGTGTCCAGCTGCGTGCTGGACTGCGAGGCCGTCGCCTTCGACGCCGCCA
ACGGCAAGCTGCTGCCCTTCCAGGTGCTGTCGAGCCGCAAGCGTGCGTGCGCGAGTGCGG
AGGACGTGCGCGTGCCGGTCTGCGTGTTCGTGTTCGACCTGCTGTACCTCAACGGCGCCC
CGCTGGTGGGCAGCACGCTGGCGCACCGCCGCAAGCTGCTGCGGGAACACTTCCGCACCC
AGCCCGGTACATGGCAGTTCGCCACGTCCAAAGACTGCAGCACTATCGAGGAAGTGCAGC
TGTTCCTTGAAGAAGCTGTGAAAGAAAGCTGCGAGGGACTCATGGTGAAGATGCTCACTG
GTGACAATTCGAAATATGATATAGCTAGGAGGTCACACAATTGGCTAAAGTTGAAGAAAG
ACTACTTGGAAGGCGTCGGAGACACGGTGGACGCTGTCATTATCGGAGCCTACCGCGGCA
AGGGCAAGCGCGCCGGCGTCTACGGAGGGTTCCTGGTCGCGTGCTACGACCCCGAGTCCG
AGCAGTTCCAGTCGCTGTGCAAGCTGGGGACCGGCTTCTCCGATGAGGACCTGCAGGCCT
TGTCCGACATGCTGAAGGAACACATTATTGATTCTCCGAGAAACTACTACAACTACGACA
GCTCCCACTCCGCCGGCGCAGGTGGCGCAGCTCTACCTGGCGCAGGACCAGATCAAGAAC
CAAGTCAAACAACCTGACGCCGCTCACGAAGACGACTTCTACTGAGCGCATCCAACTAAC
ATGAACTGAGTTACTTCACATACCCCATTGTGTCTGCTTAAATTAGATAATGTTTACAAA
ATAAAAGACTTATTTTGATGTTAAAAAAAAAA
(2672 bp)

- SilkBase 1999-2023 -