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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26905_g1_i2
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		splicing_factor_45_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
Transcript
Level		FPKM:8.10 TPM:4.21
ORF EntryO_BomoMSG21395_complete:A_BomoMSG_c26905_g1_i2
Sequence
(Nucleotide)
CGTGTGCTCTTCCGATCTCTCTGTGGATTTTTGTGTAGGTGAAATAGGTAGTACATAAAT
ATTATTAAGCAATTTAATATTTTAAAGAAACCAAAATCATGCGCAACACTAGATAAAAGT
TGAGGTTTTAAATAGAAATATAGAAAACTAGTAAAAATAACATTGTGAAGGAAACAAATC
ATTAGTTTTAACCAGCAAAGTGGTCTCATCATTCTCGACATTTATGTGGTTACTTGGCTT
TGGTGCTTGTATGGAACACATAATTGACTTTAATTCGTTAATGTTAATGATAACGCATTT
TGTGAAACGCAGCAATCCAGTCATCAAAGATGTCTCTTTATGACGACTTAGATACGATAA
AAACACGGACCACAGAAAAAGTAGCGGCATGGTCTTCAGGAATTAAGTTACTACAGTCAC
AGTTACAACTAAAAAAAGCAGCAGTTACACAACCTAAACGAGAAGCCTTGCGTCGTTCCA
CACAGGTGCTAACGCCAGTCATCGATTTAAAGAGCAAATCAAAAGATGAAGAAGAATCAA
ACTCTAGTAGTCCCAAGATTCAGCCTAAAACAATAACTGCTTCACTAAATGTCCGTGATT
TTGATTGGAATGTGGCCAATGAATATGACCCAATGTGGCCTAATGATTATGAAAAAGTTG
CAAAAGAATTGCAAGCAAAGAGGCTTCAGTCAGATGACAGAGGAGACAGGTTGGATAGGA
AACGAAAGAGCAGGTTTGGTGATGATGAAGACATAATTCCAGAGAAAACTCTAGTTGCAA
TGCAACCTGAAGAGGAGGAAGCTGAGGAGATATCAAAGAGAGCTACTGGAGTTGCTATAG
CTCCTCCACCTTCTCTGACTACAGAATCTTCATCACCACCCCCAATTAGTGCTCTACCGC
AAGCAACCGCATCAGCTGGGTTCTCCATCGGTGGTTATGGCGCTAGTTCAGTAGCTGCAA
AGATAATGGCAAAATATGGATTTAAGGAGGGTCAAGGGTTGGGTAAAAAAGAACAAGGAA
TGTCGGTGGCCTTGCAAGTCGAGAAGACTTCAAAACGCGGTGGTCGAATTATTCATGAGA
AAGACAATAACGTGATGCCACCACCAGGCTTTACAATGCAAGCGCCCGCTGGACCAGATT
CGCCAAATACATCATCTAATTCACCGCTTCTGTCAAGAAACGAGCCATCAATAACTGAAA
TAATGAAGACACCAAGCAAAGTTGTATTGCTTAGAAATATGGTTGGTCCAGGCGATGTTG
ACGAAGAACTAGAGCCCGAAGTCAAAGATGAATGCAACACAAAATATGGAGAAGTAGTCA
AAGTGCTCATTTTTGAAATGCCGAATGTACCGTCAGATGAAGCAGTTAGAATATTTGTTG
AATTCAAACGAATTGAAAGTGCTATTAAAGCAGTAGTTGATCTTAATGGACGTTTCTTCG
GTGGGAGACAAGTTAAAGCTGGTTTCTATGACGTAGAAAAGTTTAATTCACTACAATTGA
TAGAATGAAATAAATAATATGTAAATAAAAAAAAAAAAA
(1539 bp)

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