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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26905_g1_i1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		splicing_factor_45_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000380 P alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
Transcript
Level		FPKM:0.91 TPM:0.48
ORF EntryO_BomoMSG21394_5prime_partial:A_BomoMSG_c26905_g1_i1
Sequence
(Nucleotide)
CCGATCTTTTTGTGTAGGTGAAATAGCAATCCAGTCATCAAAGATGTCTCTTTATGACGA
CTTAGATACGATAAAAACACGGACCACAGAAAAAGTAGCGGCATGGTCTTCAGGAATTAA
GTTACTACAGTCACAGTTACAACTAAAAAAAGCAGCAGTTACACAACCTAAACGAGAAGC
CTTGCGTCGTTCCACACAGGTGCTAACGCCAGTCATCGATTTAAAGAGCAAATCAAAAGA
TGAAGAAGAATCAAACTCTAGTAGTCCCAAGATTCAGCCTAAAACAATAACTGCTTCACT
AAATGTCCGTGATTTTGATTGGAATGTGGCCAATGAATATGACCCAATGTGGCCTAATGA
TTATGAAAAAGTTGCAAAAGAATTGCAAGCAAAGAGGCTTCAGTCAGATGACAGAGGAGA
CAGGTTGGATAGGAAACGAAAGAGCAGGTTTGGTGATGATGAAGACATAATTCCAGAGAA
AACTCTAGTTGCAATGCAACCTGAAGAGGAGGAAGCTGAGGAGATATCAAAGAGAGCTAC
TGGAGTTGCTATAGCTCCTCCACCTTCTCTGACTACAGAATCTTCATCACCACCCCCAAT
TAGTGCTCTACCGCAAGCAACCGCATCAGCTGGGTTCTCCATCGGTGGTTATGGCGCTAG
TTCAGTAGCTGCAAAGATAATGGCAAAATATGGATTTAAGGTAAAAAACAGTTTTTATTG
CCCTTGTAAGCAGGCTTACTGCTCACCTAATGGTGAGTAGTTACCGTAACTCATGGTTGT
CAGCAATGCCAAGGACACAGCGGACCCACTGCCCTCCGTGGAGTACTCTCCATAAACTTT
GCATGAAG
(848 bp)

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