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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26892_g1_i1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		WD_repeat-containing_protein_3-like_[Bombyx_mori]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030515 F snoRNA binding
GO:0031965 C nuclear membrane
GO:0032040 C small-subunit processome
GO:0034388 C Pwp2p-containing subcomplex of 90S preribosome
GO:0044822 F RNA binding
Transcript
Level		FPKM:9.76 TPM:5.08
ORF EntryO_BomoMSG21335_5prime_partial:A_BomoMSG_c26892_g1_i1
Sequence
(Nucleotide)
TTTTTATTATATAGGTCTATGGTTTTTATGAATGAAAAGTTGAAGTTGACTTCAATTTTA
TTGGTTTTGGTGCTTAGAAAATTGAGGTTAGTGAGGTGATGATACCTAAACAAAATAAAA
AGTGTCAAGCATGGGTCTAACTAAACAATATCTGCGGTACGCCCCGACCGGCTCTTTTAA
TATTATTGCAAGTGCAGACTGTAATAGCACACATGTAACATTGAATGGTATTAGTGGTAG
ATACATCGCTGTTGGAGCATGTGAACATGTTATTATTTGGGACATGAAACTTGGTGAAAA
GGCACAAGTGTTGCCTGGAGAGAATGTAGTTGTAACACAACTTGCCGCAAGTCCTACTGG
AAACCACATGGCCGTTGGTTTGTTTGATGGAAATATTAATGTATTTGAACTCACCAACAA
TGAAGTAGTTTGTGTATTTGCTGGACACAAATCTGCTATTACTTGCTTGCAGTTTGATGA
CCAAGGACACCGTTTGGTATCTGGATCAAAGGACACAGAAGTAATTCTTTGGGATGTGAT
ATCAGAAACAGGTAAAGTAAGGTTCAGTGGCCACAAAGGTGTTATCACAAGTGTGTCATT
TATAAATGGAAAAAACTGCATTGTGACTTCATCAAAAGACACATTTGTCAAGTTTTGGGA
TATTGAGACTAAACATTGCTTCAAGACACTTGGAGGGCATCAGATGGAGGTGTGGGCTGC
AGTGCTCTTAAAAGAGGAGAGGTACTTAGTAACAGGAAGTATGGACCAAGAGCTTAGAGT
ATGGAAATTAAACTGGACTGAGGATGTAAAAGACGAGGATAAACTAAAACATCAACTTGA
AATAGTCAAACTAGAAGAAACTGACGAAATCGAAGAGAGCTCTGTTTTACAATGTCATCA
AGTTGGAACATTAGTAAGAGGTGGTAAAGGAAGAGTTGTGGGTATTGCAACGGACCCAGG
GCAGACTGTATTAGCCTGTTATGGAACCGATTCCCTTCTCGAACTTTTTGCTTTCTGCTC
AGATGAACAGGCTAAAATGAGAATGGATAAACGAATAAAGAAGCGACGAAAAAAATTAGC
TAAACTTAAAGAAACTGGTGAAGTGGACCCGGAAATTACAGAGATACCCCAAATATTAAC
ACTATCAGATGAAGTGAGAAGGCTGACTTCAGTTAAGGTGAATTCCAAGTTAAAGTCTGC
AACATTGTTACTGGGTACCACAGGGGAGGTGCGTGTTGGTATTACACTGGCTAACAATAC
AGTTGAACTGCATAGTTTGAAACTAGAAGATGGAGATGAAGTGCGGTGCTTAAAACAAAT
AACTCAGCCTGGTCATCAAAAGGACCCCAGATGTGTAGTGATCAGTTCAGATAACTTAGC
AATACTGTCTGCATCAGCAGATTCCATCAAACTCTGGAATAGATCTAGTCAGACGTGCAT
CCGTACGATGGAGGTGCCGTGCGGGCGGCCGCTGTGCGCCGCGCTGGCCCCGGGTGACCG
CCACGCGCTGGTGGGGTGTGCGGGGGGGGCGCTGCTGGTGCTGGACGTGGCGGCCGGACG
ACTCCTCGAGACCATACCCGCGCACACGGACAACTGCACCGCCCTAGGACTCACTCCGGA
TCTGAGAGGCTGCTACACGGGTGGAGCCGACAAAACTGTAAAGCTATGGCAGTTCGAATT
AATAAATGATCCAATAGTCGAAGCCAAAGGAAAGGTTTTATCATTACTTCATACTAGAAC
ACTGAAATTGGAAGAGCAAGTGTCAGCTGTAAAAATCAGTCCCAACAACAAATTCATCGC
GGTCGCCTTATTAGACTGTACTGTTAAAATATTTTTCCTTGATACATTTAAGTTCTACCT
TTCTCTTTACGGGCACAAGCTGCCAGTGCTCTGTCTGGACATAAGCTACGACTCGAACCT
CATAGCTACGGGCTCGGCGGACCGCAACGTCAAGACGTGGGGCATGGACTTCGGCGACTG
TCACAAGTCGATATTCGCGCACAACGATTCCATAACCGCGCTGCAGTTCGTGCCCAACAC
GCACTACTTCTTCACGGGCTCGAAGGACGGGAAGATCAAGCAGTGGGACGCCGACACCTC
CGAGAATATCATCACGCTGAATGGCCACGCGGGCGCGTGCCACGGCGTGTGCGTGGGCGC
GGGCGGAG
(2168 bp)

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